RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 GUSBP1Q15486 140 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 PKDREJQ9NTG1 2253 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 A0A1B0GV72 72 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 EBLN2Q6P2I7 272 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 A0A0G2JLM5 398 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 PRR33A8MZF0 331 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 CD24P25063 80 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 FAM168AQ92567 244 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 MAP1LC3AQ9H492 121 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 NUP210LQ5VU65 1888 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 SRRM5B3KS81 715 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 ABCA4P78363 2273 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
HMGA2-204ENST00000403681 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 OR4X2Q8NGF9 303 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 OR5A1Q8NGJ0 315 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 HSD52Q0P140 79 aa11.42□□□□□ -0.58
HMGA2-204ENST00000403681 PPIAL4EA0A075B759 164 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PPIAL4FP0DN26 164 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 BVES-AS1Q5T3Y7 98 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 NEUROG1Q92886 237 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 HIST1H4GQ99525 98 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 BMI1P35226 326 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 TMEM131Q92545 1883 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 FAM231BA6NCW3 169 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRR20EP86478 221 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRR20CP86479 221 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRR20DP86480 221 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRR20BP86481 221 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PRR20AP86496 221 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.586e-10■■■■■ 30.8
HMGA2-204ENST00000403681 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
HMGA2-204ENST00000403681 ZNF329Q86UD4 541 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 TMEM186Q96B77 213 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 PAX1P15863 534 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 RPL11P62913 178 aaKnown RBP11.41□□□□□ -0.58
HMGA2-204ENST00000403681 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
HMGA2-204ENST00000403681 CLEC3BP05452 202 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 S100A4P26447 101 aaKnown RBP11.4□□□□□ -0.58
HMGA2-204ENST00000403681 Q5PR19 223 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 TP53TG3Q9ULZ0 132 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 A0A1B0GW15 77 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 NCBP2LA6PVI3 153 aaKnown RBP11.4□□□□□ -0.58
HMGA2-204ENST00000403681 RNASE2P10153 161 aaKnown RBP11.4□□□□□ -0.58
HMGA2-204ENST00000403681 LGALS7P47929 136 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 TMPRSS3P57727 454 aa11.4□□□□□ -0.58
HMGA2-204ENST00000403681 CIARTQ8N365 385 aaPredicted RBP11.4□□□□□ -0.58
HMGA2-204ENST00000403681 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.58
HMGA2-204ENST00000403681 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.59
HMGA2-204ENST00000403681 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.59
HMGA2-204ENST00000403681 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 TM4SF5O14894 197 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 GLRXP35754 106 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 FAM231DQ6ZW35 169 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 OTORQ9NRC9 128 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 KIR3DS1Q14943 382 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 GTF3C1Q12789 2109 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 TTC28Q96AY4 2481 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 TRAV8-1A0A0A6YYK1 113 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 PAX2Q02962 417 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 Q6AWC8 147 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 FER1L6-AS1Q8NA97 138 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 NTN3O00634 580 aaPredicted RBP11.39□□□□□ -0.59
HMGA2-204ENST00000403681 HBDP02042 147 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 TCRAP04437 139 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
HMGA2-204ENST00000403681 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 OR9G4Q8NGQ1 327 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 SIGMAR1Q99720 223 aa11.39□□□□□ -0.59
HMGA2-204ENST00000403681 NHP2Q9NX24 153 aaKnown RBP11.39□□□□□ -0.59
HMGA2-204ENST00000403681 SPTBN1Q01082 2364 aaKnown RBP11.38□□□□□ -0.59
HMGA2-204ENST00000403681 CCL3L1P16619 93 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
HMGA2-204ENST00000403681 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 LOC107984156A0A0G2JMH3 177 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 ARL17AQ8IVW1 177 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 C1orf162Q8NEQ5 155 aaPredicted RBP11.38□□□□□ -0.59
HMGA2-204ENST00000403681 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 SPRR3Q9UBC9 169 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
HMGA2-204ENST00000403681 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
HMGA2-204ENST00000403681 DEFB125Q8N687 156 aa11.37□□□□□ -0.59
HMGA2-204ENST00000403681 RPUSD1Q9UJJ7 312 aaKnown RBP11.37□□□□□ -0.59
HMGA2-204ENST00000403681 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
HMGA2-204ENST00000403681 F2RL2O00254 374 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms