RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PAIP2BQ9ULR5 123 aaKnown RBP4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 TRAV30A0A087WSZ9 112 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 C9orf170A2RU37 121 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 MPTX1A8MV57 137 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 DNASE2O00115 360 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 WRBO00258 174 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 NDUFB6O95139 128 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 IFNA4P05014 189 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 IL4P05112 153 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 PSG1P11464 419 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 SLC25A4P12235 298 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 IL7P13232 177 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 ANXA7P20073 488 aaKnown RBP4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 CRYBB3P26998 211 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 BMI1P35226 326 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 P2RY1P47900 373 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 DEFB131AP59861 70 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 EWSR1Q01844 656 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 USF2Q15853 346 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 GGNBP1Q5YKI7 109 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 LEMD1Q68G75 181 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 GSG1LQ6UXU4 331 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 LRTM2Q8N967 370 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 U3KQ87 197 aa4.25□□□□□ -1.73
HMGB1P20-201ENST00000402555 LYSTQ99698 3801 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 IGKV1D-37A0A075B6S9 117 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 A0A0J9YWU9 116 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 A0A1W2PS18 150 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 NAP1L6A6NFF2 107 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 ZFP92A6NM28 416 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 KNCNA6PVL3 124 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 H3BP45 60 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 K7EQG2 157 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 PLA2G10O15496 165 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 SPRY2O43597 315 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 SCGB2A1O75556 95 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 TOMM40O96008 361 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 HNRNPCP07910 306 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 ZNF688P0C7X2 276 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 RD3LP0DJH9 198 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 APOC4P55056 127 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 UBE2MP61081 183 aaKnown RBP4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 PAFAH1B2P68402 229 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 ZNF90Q03938 601 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 DHRS2Q13268 280 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR2F1Q13607 317 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 GAMTQ14353 236 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 ETFRF1Q6IPR1 90 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 LYG2Q86SG7 212 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 NOXA1Q86UR1 476 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 STPG3Q8N7X2 389 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR51G1Q8NGK1 321 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 Q8WTZ3 238 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 DEDD2Q8WXF8 326 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 SLC35E1Q96K37 410 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 PBDC1Q9BVG4 233 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 TMEM231Q9H6L2 316 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 CACFD1Q9UGQ2 172 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 TMED3Q9Y3Q3 217 aa4.24□□□□□ -1.73
HMGB1P20-201ENST00000402555 IGKV1OR2-108A0A075B7D4 117 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 KIR2DL5BA0A0G2JN68 375 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 KIR2DL5BA0A0G2JPC4 375 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 FAM90A26D6RGX4 464 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 UBE2CO00762 179 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 SYNGR2O43760 224 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 MED6O75586 246 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 CCNKO75909 580 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 CD5P06127 495 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR4E1P0C645 316 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 SLC25A6P12236 298 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 GPX4P36969 197 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 LYZP61626 148 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 POLR2GP62487 172 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 C4orf46Q504U0 113 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 SPANXN5Q5MJ07 72 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 Q6ZWC4 215 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 KIR2DL5AQ8N109 375 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 KIR2DL5BQ8NHK3 375 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 DCANP1Q8TF63 244 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 GLMPQ8WWB7 406 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 RNF183Q96D59 192 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 RNF125Q96EQ8 232 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 GRAMD2BQ96HH9 432 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 NARS2Q96I59 477 aaKnown RBP4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 CSTL1Q9H114 145 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 NDUFA13Q9P0J0 144 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 TP53TG1Q9Y2A0 90 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 ALMS1Q8TCU4 4167 aa4.23□□□□□ -1.73
HMGB1P20-201ENST00000402555 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 TRAV6A0A075B6T7 132 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 TRAV2A0A0B4J234 112 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 PIGBOS1A0A0B4J2F0 54 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 LCE6AA0A183 80 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 CENPXA8MT69 81 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 PRSS46E5RG02 174 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms