RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NRN1Q9NPD7 142 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 KIAA2026Q5HYC2 2103 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 PSG1P11464 419 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 C15orf32Q32M92 178 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 MGST2Q99735 147 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 SEPSECSQ9HD40 501 aaKnown RBP14.93□□□□□ -0.02
COL18A1-204ENST00000400337 SRD5A1P18405 259 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 PEF1Q9UBV8 284 aaKnown RBP14.93□□□□□ -0.02
COL18A1-204ENST00000400337 H0YJW9 148 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 WISP1O95388 367 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 MRAP2Q96G30 205 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 TRGV2A0A075B6R0 118 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 LY6G6EA0A0G2JKS1 128 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 PMS2P5A8MQ11 134 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 LY6HO94772 140 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 TTC9CQ8N5M4 171 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 U3KQA8 63 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 C19orf67A6NJJ6 358 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 KLF17Q5JT82 389 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-204ENST00000400337 PRDM13Q9H4Q3 707 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 LEPP41159 167 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 NEUROG1Q92886 237 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 HS3ST6Q96QI5 342 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 CACNA1HO95180 2353 aa14.92□□□□□ -0.02
COL18A1-204ENST00000400337 SELENOKQ9Y6D0 94 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BKO60814 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BJP06899 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BOP23527 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BBP33778 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BDP58876 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BCP62807 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST2H2BEQ16778 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 ZNF585BQ52M93 769 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BHQ93079 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BNQ99877 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 HIST1H2BMQ99879 126 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 TRAV21A0A0B4J279 112 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-204ENST00000400337 OR10J3Q5JRS4 329 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 LYPD2Q6UXB3 125 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 CD33P20138 364 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 RPL15P61313 204 aaKnown RBP14.91□□□□□ -0.02
COL18A1-204ENST00000400337 SCRT1Q9BWW7 348 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 SCGB1A1P11684 91 aa14.91□□□□□ -0.02
COL18A1-204ENST00000400337 WFDC12Q8WWY7 111 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 RSPO3Q9BXY4 272 aaPredicted RBP14.9□□□□□ -0.02
COL18A1-204ENST00000400337 COL8A2P25067 703 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 UNQ6494/PRO21346Q6UXR6 183 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 ASCL4Q6XD76 172 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 BRD3OSQ6XYD6 125 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 STHQ8IWL8 128 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 NDUFA3O95167 84 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 A0A0G2JRQ6 117 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 A0A1B0GWJ7 208 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 NPIPB5A8MRT5 1133 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 EXOC3-AS1Q8N2X6 119 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 OR13C6PQ8NH95 151 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 AGMATQ9BSE5 352 aa14.9□□□□□ -0.02
COL18A1-204ENST00000400337 TRAV1-1A0A0B4J248 108 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 SIGLEC15Q6ZMC9 328 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 C2orf88Q9BSF0 95 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 MRPL16Q9NX20 251 aaKnown RBP14.89□□□□□ -0.03
COL18A1-204ENST00000400337 MINOS1Q5TGZ0 78 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 Q6ZS49 121 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 MINOS1-NBL1R4GNA1 71 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 BUB1B-PAK6H3BSN5 160 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 TSKUQ8WUA8 353 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 SLC25A39Q9BZJ4 359 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-204ENST00000400337 HTN3P15516 51 aa14.89□□□□□ -0.03
COL18A1-204ENST00000400337 ETV2O00321 342 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-204ENST00000400337 DUSP14O95147 198 aaKnown RBP14.88□□□□□ -0.03
COL18A1-204ENST00000400337 NUDT10Q8NFP7 164 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 NUDT11Q96G61 164 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 RNF5Q99942 180 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 DERL1Q9BUN8 251 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 ABCA1O95477 2261 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 NTF4P34130 210 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 C5orf64Q2M2E5 130 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 ZNF407Q9C0G0 2248 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 LRRK1Q38SD2 2015 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 IGKV2-40A0A087WW87 121 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-204ENST00000400337 IGKV2D-40P01614 121 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-204ENST00000400337 DSCR9P59020 149 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 Q6ZRM9 215 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 PROK2Q9HC23 129 aa14.88□□□□□ -0.03
COL18A1-204ENST00000400337 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 GNB1LQ9BYB4 327 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 USF3Q68DE3 2245 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 OOSP1A8MZH6 123 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 FAM169BQ8N8A8 192 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 ALKBH7Q9BT30 221 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-204ENST00000400337 MRPS16Q9Y3D3 137 aaKnown RBP14.87□□□□□ -0.03
COL18A1-204ENST00000400337 CXCL1P09341 107 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 GZMBP10144 247 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 PRR30Q53SZ7 412 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-204ENST00000400337 ST20Q9HBF5 79 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 H3BUX3 64 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 LINC00614P0C842 121 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 RPRMLQ8N4K4 120 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms