RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 ZXDCQ2QGD7 858 aaPredicted RBP7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 C4AP0C0L4 1744 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 C4BP0C0L5 1744 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 TIMP3P35625 211 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 RNF115Q9Y4L5 304 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 LRRC37A3O60309 1634 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 GFI1BQ5VTD9 330 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 SCARF2Q96GP6 870 aaPredicted RBP7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 PLXNB3Q9ULL4 1909 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 RAMP3O60896 148 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 IL15RAQ13261 267 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 TBC1D29Q9UFV1 150 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 ZNF462Q96JM2 2506 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 TRBV25-1A0A075B6N4 114 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 PYYP10082 97 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 ZFP36L2P47974 494 aaKnown RBP7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 DIP2BQ9P265 1576 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 PGFP49763 221 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 C1orf53Q5VUE5 145 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 TRAV14DV4A0A0A6YYC5 116 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 C1QL1O75973 258 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 FGF6P10767 208 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 NREPQ16612 68 aa7.21□□□□□ -1.25
CACNA1C-220ENST00000399655 A0A087X0K7 114 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 RPL23P62829 140 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 C3P01024 1663 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 SPATA31B1PQ5VZV4 182 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 CTSBP07858 339 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF703Q9H7S9 590 aaPredicted RBP7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 K7EP34 96 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 RS1O15537 224 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL2P13500 99 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 LTBP3Q9NS15 1303 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 K7EP13 123 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 SLC25A16P16260 332 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 PLXNB2O15031 1838 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A1W2PQD3 144 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 SRRM4A7MD48 611 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 PGLYRP1O75594 196 aaPredicted RBP7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 MRM2Q9UI43 246 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.26
CACNA1C-220ENST00000399655 J3QW42 95 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 PRCDQ00LT1 54 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIGD2BQ4VC39 106 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 RNF125Q96EQ8 232 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 PRR13Q9NZ81 148 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 PIEZO1Q92508 2521 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 MUC21A0A0G2JKD1 596 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 MUC21A0A140T8X8 626 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 MUC21Q5SSG8 566 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 SP5Q6BEB4 398 aaPredicted RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 C15orf53Q8NAA6 179 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 CGAP01215 116 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 FOXC1Q12948 553 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 TEX37Q96LM6 180 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 SCO2A0A1W2PP80 73 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A1B0GTI1 187 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 LIPT2A6NK58 231 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 A6NNC1 897 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 CXorf51AA0A1B0GTR3 108 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 B9A039 149 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 SBF1O95248 1867 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 CXCL2P19875 107 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 TMEM187Q14656 261 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF876PQ49A33 203 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 BRCA1P38398 1863 aaKnown RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 IGFBP3P17936 291 aaPredicted RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
CACNA1C-220ENST00000399655 RALGAPA2Q2PPJ7 1873 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 ACACBO00763 2458 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 MYO9AB2RTY4 2548 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A0B4J2C4 111 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL13Q99616 98 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 A0A1W2PPE3 182 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 SNRPCP09234 159 aaKnown RBP7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 CCL3P10147 92 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 HIST1H2BLQ99880 126 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 ZNF492Q9P255 531 aa7.19□□□□□ -1.26
CACNA1C-220ENST00000399655 NPIPB5A8MRT5 1133 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms