RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SAXO1Q8IYX7 474 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 NOTCH3Q9UM47 2321 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 CD300EQ496F6 205 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 TNFSF13O75888 250 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 HOXA6P31267 233 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 AQP3Q92482 292 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 IGKV1-8A0A0C4DH67 115 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 PSG1P11464 419 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 CCL1P22362 96 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 PSG7Q13046 419 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 C1QL4Q86Z23 238 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 TFF1P04155 84 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 UBE2BP63146 152 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 WFDC9Q8NEX5 89 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 RSPO3Q9BXY4 272 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 PRR4Q16378 134 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 H1FOOQ8IZA3 346 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 LHFPL6Q9Y693 200 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 BCL2P10415 239 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 SS18Q15532 418 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 AMELYQ99218 206 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 GGACTQ9BVM4 153 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 ABCA4P78363 2273 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 PIN1P1O15428 100 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 SPSB3Q6PJ21 355 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 IFI27L2Q9H2X8 130 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
CACNA1C-216ENST00000399638 IL18BPO95998 194 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 TIMP3P35625 211 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 NDPQ00604 133 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 ZNF474Q6S9Z5 364 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 C1QCP02747 245 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 CHTOPQ9Y3Y2 248 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 POLEQ07864 2286 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 ASPHD2Q6ICH7 369 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 A0A096LPF7 62 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 IGHV1-46P01743 117 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 DANCRP0C864 163 aa9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 SRSF8Q9BRL6 282 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 KLK5Q9Y337 293 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-216ENST00000399638 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 HAMPP81172 84 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 C9orf153Q5TBE3 101 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 TMEM258P61165 79 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 GPR179Q6PRD1 2367 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 TMEM222Q9H0R3 208 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 IQCF6A8MYZ5 107 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 ATRAIDQ6UW56 229 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 APCDD1LQ8NCL9 501 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 COL11A1P12107 1806 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 TRBV6-7A0A0A0MS04 114 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A10PA6NDY2 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A18PA6NE21 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A16PA6NEW6 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A20PA6NIJ5 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A8PA6NJQ4 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A7PA6NKC0 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A22PA8MWA6 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A12PA8MX19 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A5PA8MXJ8 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A23PA8MXZ1 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 OVOL1O14753 267 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A15PP0C7V4 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A13PP0C7W8 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A14PP0C7W9 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM90A24PP0C7X0 464 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 ZNF257Q9Y2Q1 563 aa9.09□□□□□ -0.95
CACNA1C-216ENST00000399638 ANKRD31Q8N7Z5 1873 aa9.09□□□□□ -0.96
CACNA1C-216ENST00000399638 PLXNA1Q9UIW2 1896 aa9.09□□□□□ -0.96
CACNA1C-216ENST00000399638 IGLV1-36A0A0B4J1U3 117 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 GATA3P23771 443 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 DMRTC2Q8IXT2 367 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 FBLN5Q9UBX5 448 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 TEX22C9J3V5 150 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 C15orf32Q32M92 178 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 C6orf226Q5I0X4 101 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 C15orf53Q8NAA6 179 aa9.08□□□□□ -0.96
CACNA1C-216ENST00000399638 Q9HAA7 133 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms