RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 IZUMO1RA6ND01 250 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 RNF114Q9Y508 228 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 GATA4P43694 442 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 C10orf126Q8N4M7 172 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 A0A0A6YYD4 124 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 NDPQ00604 133 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 SPTA1P02549 2419 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 IGHV4-39P01824 125 aa11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 SRP19P09132 144 aaKnown RBP11.73□□□□□ -0.53
PCDHA11-201ENST00000398640 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 ZNF688P0C7X2 276 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 ASCL2Q99929 193 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 HEATR5BQ9P2D3 2071 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 CD28P10747 220 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 ANAPC1Q9H1A4 1944 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
PCDHA11-201ENST00000398640 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 A0A1B0GV90 55 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 SLC25A20O43772 301 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 NXT2Q9NPJ8 142 aaKnown RBP11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.53
PCDHA11-201ENST00000398640 C5orf24Q7Z6I8 188 aa11.71□□□□□ -0.54
PCDHA11-201ENST00000398640 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.54
PCDHA11-201ENST00000398640 TRGV11A0A075B6L2 103 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 E7EQL1 145 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 LINC00614P0C842 121 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 WT1P19544 449 aaPredicted RBP11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 A0A087WX48 190 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 Q6AWC8 147 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 NPIPB5A8MRT5 1133 aa11.7□□□□□ -0.54
PCDHA11-201ENST00000398640 IGHV1-3A0A0C4DH29 117 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 CEACAM8P31997 349 aaPredicted RBP11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 TRAV2A0A0B4J234 112 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 A0A1B0GV72 72 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 A0A1B0GWB2 263 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 NPC2P61916 151 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 TEX38Q6PEX7 206 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 ADMP35318 185 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 COQ2Q96H96 371 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 FAM169BQ8N8A8 192 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 IGKV1D-8A0A087WSZ0 117 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 LYPD3O95274 346 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 GZMBP10144 247 aa11.69□□□□□ -0.54
PCDHA11-201ENST00000398640 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 A0A1B0GW15 77 aa11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 MBNL3Q9NUK0 354 aaKnown RBP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 TDGF1P3P51864 188 aa11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 ARTNQ5T4W7 220 aa11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
PCDHA11-201ENST00000398640 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 RNF222A6NCQ9 220 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 EFNB3Q15768 340 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 LYPD2Q6UXB3 125 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 HELZP42694 1942 aaKnown RBP11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 PAX2Q02962 417 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 NCOR1O75376 2440 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 K7EM74 188 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 MRAPQ8TCY5 172 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 FCN3O75636 299 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 CCL1P22362 96 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 GATA3P23771 443 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 BTCP35070 178 aa11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
PCDHA11-201ENST00000398640 LINC00158P58513 81 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
PCDHA11-201ENST00000398640 GFI1Q99684 422 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms