RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ARL14EPLP0DKL9 152 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 TCL1AP56279 114 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 RPL31P62899 125 aaKnown RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 KLF5Q13887 457 aaPredicted RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 PDLIM3Q53GG5 364 aaPredicted RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 INO80CQ6PI98 192 aaPredicted RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 ZNF788Q6ZQV5 615 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 Q8TCH9 128 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 CXXC4Q9H2H0 198 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 GEMIN7Q9H840 131 aaKnown RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 SPCS1Q9Y6A9 102 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 PMS2P5A8MQ11 134 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SYS1-DBNDD2H3BUS1 97 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 F2RL2O00254 374 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 CRXO43186 299 aaPredicted RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 APELAP0DMC3 54 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 MGST1P10620 155 aaKnown RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 UQCRFS1P47985 274 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 GNG4P50150 75 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 CCL8P80075 99 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 MLANAQ16655 118 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 PLA2G2CQ5R387 149 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SPATA31B1PQ5VZV4 182 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SPATA12Q7Z6I5 190 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 GCSAMQ8N6F7 178 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 JMJD8Q96S16 334 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TNFRSF19Q9NS68 423 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TSSC4Q9Y5U2 329 aaPredicted RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 TEX48A0A1B0GUV7 120 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 IZUMO1RA6ND01 250 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 C15orf62A8K5M9 175 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 K7EM74 188 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 FOXH1O75593 365 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 ZNF883P0CG24 379 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 FABP2P12104 132 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 FAM27E3Q08E93 113 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TIGITQ495A1 244 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 OXLD1Q5BKU9 147 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SLC35E4Q6ICL7 350 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 RASL11AQ6T310 242 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 ITLN1Q8WWA0 313 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 GLMPQ8WWB7 406 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 C11orf52Q96A22 123 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 PERPQ96FX8 193 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 MS4A5Q9H3V2 200 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SELENOKQ9Y6D0 94 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TMEM189A5PLL7 270 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 ISLRO14498 428 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 ADH4P08319 380 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 STAG3L2P0CL84 134 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 DLX1P56177 255 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 FXYD3Q14802 87 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 VWC2Q2TAL6 325 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 CCDC144NLQ6NUI1 221 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TREML4Q6UXN2 200 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SPACA3Q8IXA5 215 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 KIR3DL3Q8N743 410 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 FAM216BQ8N7L0 139 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 S1PR3Q99500 378 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 CCL13Q99616 98 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 SERTAD4Q9NUC0 356 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 TMEM140Q9NV12 185 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
SSR1-202ENST00000397511 YTHDF2Q9Y5A9 579 aaKnown RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 SPTAN1Q13813 2472 aaKnown RBP4.1□□□□□ -1.75
SSR1-202ENST00000397511 MUC6Q6W4X9 2439 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 COL6A6A6NMZ7 2263 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 CACNA1BQ00975 2339 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 SMIM27A0A1W2PRY6 76 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 C15orf65H3BRN8 121 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 IGKV1-16P04430 117 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 COX8AP10176 69 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 PPOXP50336 477 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 CENPWQ5EE01 88 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 SEM1Q6ZVN7 128 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 WIPF2Q8TF74 440 aaPredicted RBP4.09□□□□□ -1.75
SSR1-202ENST00000397511 ZNF479Q96JC4 524 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 MAP1LC3CQ9BXW4 147 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 RNASE7Q9H1E1 156 aaKnown RBP4.09□□□□□ -1.75
SSR1-202ENST00000397511 TECRQ9NZ01 308 aaKnown RBP4.09□□□□□ -1.75
SSR1-202ENST00000397511 ZNF835Q9Y2P0 537 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 ZNF257Q9Y2Q1 563 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 CSMD2Q7Z408 3487 aa4.09□□□□□ -1.75
SSR1-202ENST00000397511 HELTA6NFD8 242 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 LEPROTL1O95214 131 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 SAA2P0DJI9 122 aaPredicted RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 ERVK-16P61578 105 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 MEF2CQ06413 473 aaPredicted RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 KIR3DS1Q14943 382 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 IBA57Q5T440 356 aaKnown RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 BLNKQ8WV28 456 aa4.09□□□□□ -1.76
SSR1-202ENST00000397511 HSD17B10Q99714 261 aaKnown RBP4.09□□□□□ -1.76
SSR1-202ENST00000397511 MGST2Q99735 147 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms