RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 PSG1P11464 419 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 ZNF90Q03938 601 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 Q6ZSV7 163 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 SFT2D1Q8WV19 159 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 MS4A10Q96PG2 267 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 SERTAD4Q9NUC0 356 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 FUT9Q9Y231 359 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 MAP1LC3B2A6NCE7 125 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 F8W735 103 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 TGOLN2O43493 480 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 NDUFS6O75380 124 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 IFNA1P01562 189 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 CTSGP08311 255 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 PSMB3P49720 205 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 FHITP49789 147 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 C10orf113Q5VZT2 155 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 ZNF343Q6P1L6 599 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 PQLC2Q6ZP29 291 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 MYOZ3Q8TDC0 251 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 TMEM190Q8WZ59 177 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 RAB24Q969Q5 203 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 MAP1LC3BQ9GZQ8 125 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 HRH4Q9H3N8 390 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 VSIRQ9H7M9 311 aa14.79□□□□□ -0.04
TSPAN4-204ENST00000397404 CXorf1O96002 111 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 CLEC3BP05452 202 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 TIGITQ495A1 244 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 KHDC3LQ587J8 217 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 FAM122CQ6P4D5 195 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 UBE2E2Q96LR5 201 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 DUX5Q96PT3 197 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 TECRQ9NZ01 308 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 RFNGQ9Y644 331 aa14.78□□□□□ -0.04
TSPAN4-204ENST00000397404 SETXQ7Z333 2677 aaKnown RBP14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 OR2T8A6NH00 312 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 BMPR1BO00238 502 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 STAG3L2P0CL84 134 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 STAG3L3P0CL85 134 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 FAM78BQ5VT40 261 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 OR4X2Q8NGF9 303 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 RNF125Q96EQ8 232 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 CCDC140Q96MF4 163 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 ARL2-SNX15V9GYD0 113 aa14.77□□□□□ -0.04
TSPAN4-204ENST00000397404 A0A1B0GUS0 222 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 WI2-2373I1.2A0A1W2PRP0 233 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 GPR183P32249 361 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 COMMD7Q86VX2 200 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 OR4F5Q8NH21 305 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 TXNDC17Q9BRA2 123 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 GSX1Q9H4S2 264 aaPredicted RBP14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 HIGD1AQ9Y241 93 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 C8orf88P0DMB2 117 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 ZNF726P1Q15940 193 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 TMEM95Q3KNT9 176 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 KLHDC1Q8N7A1 406 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 ZNF491Q8N8L2 437 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 TMEM37Q8WXS4 190 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 SLC25A22Q9H936 323 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 MANBALQ9NQG1 85 aa14.76□□□□□ -0.05
TSPAN4-204ENST00000397404 GATA2P23769 480 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 CLEC19AQ6UXS0 136 aa14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 OR1B1Q8NGR6 318 aa14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 SUN5Q8TC36 379 aa14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 FAM210AQ96ND0 272 aa14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 SEPSECSQ9HD40 501 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 TMEM167BQ9NRX6 74 aa14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 MRPL27Q9P0M9 148 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-204ENST00000397404 ANKRD34BA5PLL1 514 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 NDUFA4O00483 81 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 GGCTO75223 188 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 IL4P05112 153 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 ORM2P19652 201 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 ARL3P36405 182 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 GCSAMLQ5JQS6 135 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 LCN15Q6UWW0 184 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 LINC00305Q7Z4B0 112 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 ZNF329Q86UD4 541 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 PCNPQ8WW12 178 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 KLK15Q9H2R5 256 aa14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 PEF1Q9UBV8 284 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-204ENST00000397404 ADMP35318 185 aa14.73□□□□□ -0.05
TSPAN4-204ENST00000397404 LYZP61626 148 aa14.73□□□□□ -0.05
TSPAN4-204ENST00000397404 PEA15Q15121 130 aa14.73□□□□□ -0.05
TSPAN4-204ENST00000397404 F8P00451 2351 aa14.73□□□□□ -0.05
TSPAN4-204ENST00000397404 CDX1P47902 265 aaPredicted RBP14.72□□□□□ -0.05
TSPAN4-204ENST00000397404 CHRDL1Q9BU40 450 aa14.72□□□□□ -0.05
TSPAN4-204ENST00000397404 NKX6-2Q9C056 277 aaPredicted RBP14.72□□□□□ -0.05
TSPAN4-204ENST00000397404 RABAC1Q9UI14 185 aa14.72□□□□□ -0.05
TSPAN4-204ENST00000397404 PUS1Q9Y606 427 aaKnown RBP eCLIP14.72□□□□□ -0.05
TSPAN4-204ENST00000397404 LGALS1P09382 135 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 KIAA0141Q14154 515 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 OR5AU1Q8NGC0 362 aa14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 WIPF2Q8TF74 440 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 NARS2Q96I59 477 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 GPR82Q96P67 336 aa14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 GNB4Q9HAV0 340 aa14.71□□□□□ -0.05
TSPAN4-204ENST00000397404 IGHV3-23P01764 117 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 S100A1P23297 94 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms