RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 IGHV3-23P01764 117 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
LMCD1-202ENST00000397386 GPR183P32249 361 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 FHITP49789 147 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 RAB2AP61019 212 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 RELQ04864 619 aaPredicted RBP9.81□□□□□ -0.84
LMCD1-202ENST00000397386 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 OR5AU1Q8NGC0 362 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 LYPD6BQ8NI32 183 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 FAM213BQ8TBF2 198 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 CHRDL1Q9BU40 450 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 ACTR3CQ9C0K3 210 aaPredicted RBP9.81□□□□□ -0.84
LMCD1-202ENST00000397386 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
LMCD1-202ENST00000397386 NF1P21359 2839 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 TEP1Q99973 2627 aaKnown RBP9.8□□□□□ -0.84
LMCD1-202ENST00000397386 TRAV1-1A0A0B4J248 108 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 CTXND1A0A1B0GTU2 59 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 CLPSL1A2RUU4 121 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
LMCD1-202ENST00000397386 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
LMCD1-202ENST00000397386 RHOBP62745 196 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 ZNF600Q6ZNG1 722 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 S100A7AQ86SG5 101 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 MBD3L1Q8WWY6 194 aa9.8□□□□□ -0.84
LMCD1-202ENST00000397386 RCC1LQ96I51 464 aaKnown RBP9.8□□□□□ -0.84
LMCD1-202ENST00000397386 MRPL32Q9BYC8 188 aaKnown RBP9.8□□□□□ -0.84
LMCD1-202ENST00000397386 A0A1W2PPV4 95 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 WI2-2373I1.2A0A1W2PRP0 233 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 TEX46H3BTG2 121 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 COX7A2P2O60397 106 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 OR5G3P0C626 314 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 ARL3P36405 182 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
LMCD1-202ENST00000397386 GCSAMLQ5JQS6 135 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 LCNL1Q6ZST4 164 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
LMCD1-202ENST00000397386 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
LMCD1-202ENST00000397386 HYPMO75409 117 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 HBE1P02100 147 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
LMCD1-202ENST00000397386 S100A7P31151 101 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 NDUFA5Q16718 116 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 C10orf113Q5VZT2 155 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 RNF125Q96EQ8 232 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 SEPSECSQ9HD40 501 aaKnown RBP9.78□□□□□ -0.84
LMCD1-202ENST00000397386 MRPL27Q9P0M9 148 aaKnown RBP9.78□□□□□ -0.84
LMCD1-202ENST00000397386 FUT9Q9Y231 359 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
LMCD1-202ENST00000397386 LINC00862A6NCI5 91 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 NUDT19A8MXV4 375 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 NDUFA4O00483 81 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 GGCTO75223 188 aaKnown RBP9.77□□□□□ -0.84
LMCD1-202ENST00000397386 IGHV3-11P01762 117 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 IL4P05112 153 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 PROK1P58294 105 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 FAM78BQ5VT40 261 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 PATE2Q6UY27 113 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 RNF24Q9Y225 148 aa9.77□□□□□ -0.84
LMCD1-202ENST00000397386 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.84
LMCD1-202ENST00000397386 MAP1LC3B2A6NCE7 125 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 BMPR1BO00238 502 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 ORM2P19652 201 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 TAS2R45P59539 299 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 LYZP61626 148 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 OR1B1Q8NGR6 318 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 C4orf3Q8WVX3 66 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 PCNPQ8WW12 178 aaKnown RBP9.77□□□□□ -0.85
LMCD1-202ENST00000397386 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 MAP1LC3BQ9GZQ8 125 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 SLC25A22Q9H936 323 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 GNB4Q9HAV0 340 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
LMCD1-202ENST00000397386 PPP5D1E7EU14 171 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 I3L521 148 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 PMS2P11Q13670 270 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 TOMM20LQ6UXN7 152 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 SSX7Q7RTT5 188 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 LINC00305Q7Z4B0 112 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 HRH4Q9H3N8 390 aa9.76□□□□□ -0.85
LMCD1-202ENST00000397386 TECRQ9NZ01 308 aaKnown RBP9.76□□□□□ -0.85
LMCD1-202ENST00000397386 ANKRD34BA5PLL1 514 aa9.75□□□□□ -0.85
LMCD1-202ENST00000397386 CXorf1O96002 111 aa9.75□□□□□ -0.85
LMCD1-202ENST00000397386 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
LMCD1-202ENST00000397386 C8orf88P0DMB2 117 aa9.75□□□□□ -0.85
LMCD1-202ENST00000397386 FOXL1Q12952 345 aa9.75□□□□□ -0.85
LMCD1-202ENST00000397386 USF2Q15853 346 aaPredicted RBP9.75□□□□□ -0.85
LMCD1-202ENST00000397386 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms