RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ITGB4P16144 1822 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 CTSBP07858 339 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 NABP1Q96AH0 204 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 ERVH48-1M5A8F1 160 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 NOVP48745 357 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
SMU1-201ENST00000397149 NEUROG3Q9Y4Z2 214 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 GTF3C1Q12789 2109 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 TRBV5-5A0A0J9YX44 114 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 PPBPP02775 128 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 MPV17L2Q567V2 206 aa10.23□□□□□ -0.77
SMU1-201ENST00000397149 MRPS18AQ9NVS2 196 aaKnown RBP10.23□□□□□ -0.77
SMU1-201ENST00000397149 MLNRO43193 412 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 IGHG4P01861 327 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 ADAMTSL5Q6ZMM2 481 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 TMEM256Q8N2U0 113 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 SSC5DA1L4H1 1573 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 VCYO14598 125 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 ATP5IP56385 69 aaPredicted RBP10.22□□□□□ -0.77
SMU1-201ENST00000397149 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 OCC1Q8TAD7 63 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 CEP250Q9BV73 2442 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 POLEQ07864 2286 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 UPK2O00526 184 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 MBNL3Q9NUK0 354 aaKnown RBP10.22□□□□□ -0.77
SMU1-201ENST00000397149 NGFRP08138 427 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 Q9HAA7 133 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 LINC00312Q9Y6C7 94 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 C4AP0C0L4 1744 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 TRAV12-2A0A075B6T6 113 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 ZNF138P52744 262 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 TMEM158Q8WZ71 300 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 TMEM133Q9H2Q1 129 aa10.22□□□□□ -0.77
SMU1-201ENST00000397149 SELLP14151 372 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 IGHV1-2P23083 117 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 SRSF8Q9BRL6 282 aaKnown RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 MBD3L4A6NDZ8 208 aaPredicted RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 MBD3L3A6NE82 208 aaPredicted RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 MBD3L5A6NJ08 208 aaPredicted RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 H3BUX3 64 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 PSG7Q13046 419 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 MBD3L2Q8NHZ7 208 aaPredicted RBP10.21□□□□□ -0.77
SMU1-201ENST00000397149 CCL20P78556 96 aa10.21□□□□□ -0.77
SMU1-201ENST00000397149 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 DKK1O94907 266 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.78
SMU1-201ENST00000397149 FAM166AQ6J272 317 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 A0A1B0GUL6 1792 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 C15orf61A6NNL5 157 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.78
SMU1-201ENST00000397149 PPP1R3EQ9H7J1 279 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 IGKV1OR2-108A0A075B7D4 117 aa10.21□□□□□ -0.78
SMU1-201ENST00000397149 SYNJ2BPP57105 145 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 A0A0G2JK05 382 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 BTAF1O14981 1849 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 EP300Q09472 2414 aaPredicted RBP10.2□□□□□ -0.78
SMU1-201ENST00000397149 TIAF1O95411 115 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 CRYGCP07315 174 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.2□□□□□ -0.78
SMU1-201ENST00000397149 TMEM170AQ8WVE7 144 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 IGKV1-5P01602 117 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 IRF3Q14653 427 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 C10orf55Q5SWW7 151 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 LCN12Q6JVE5 192 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 IQCF6A8MYZ5 107 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 KIR3DS1Q14943 382 aa10.2□□□□□ -0.78
SMU1-201ENST00000397149 PILRAQ9UKJ1 303 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 PAX9P55771 341 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 A0A0G2JMM0 328 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 A0A1W2PPB8 328 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 GAGE12BA1L429 117 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 KIR3DP1A8MWS1 328 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 GAGE7O76087 117 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 DEFB131AP59861 70 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 C1orf100Q5SVJ3 147 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 RNASE6Q93091 150 aaKnown RBP10.19□□□□□ -0.78
SMU1-201ENST00000397149 ANKRD36CQ5JPF3 1778 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 ZNF525Q8N782 197 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 COX5BP10606 129 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 CEACAM1P13688 526 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
SMU1-201ENST00000397149 SH2D1AO60880 128 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 C9orf106Q8NAJ2 232 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 RBM38Q9H0Z9 239 aaKnown RBP10.18□□□□□ -0.78
SMU1-201ENST00000397149 ATRXP46100 2492 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms