RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FABP1P07148 127 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 SULT1A2P50226 295 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 RAB9AP51151 201 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 B2MP61769 119 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 OXLD1Q5BKU9 147 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 KLK15Q9H2R5 256 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 SERTAD4Q9NUC0 356 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 SLC45A2Q9UMX9 530 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 OR2T8A6NH00 312 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 PSMB8P28062 276 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
SEC13-209ENST00000397117 ZNF90Q03938 601 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 FOXE3Q13461 319 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 ACOT6Q3I5F7 207 aaPredicted RBP10.25□□□□□ -0.77
SEC13-209ENST00000397117 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 Q6ZRG5 221 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 ZNF502Q8TBZ5 544 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 I3L521 148 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 NUPL2O15504 423 aaKnown RBP10.24□□□□□ -0.77
SEC13-209ENST00000397117 ELANEP08246 267 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 M6PRP20645 277 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 TIGITQ495A1 244 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
SEC13-209ENST00000397117 KLHDC1Q8N7A1 406 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 FAM213BQ8TBF2 198 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
SEC13-209ENST00000397117 AURKAIP1Q9NWT8 199 aaPredicted RBP10.24□□□□□ -0.77
SEC13-209ENST00000397117 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
SEC13-209ENST00000397117 CLEC3BP05452 202 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 GATA2P23769 480 aaPredicted RBP10.23□□□□□ -0.77
SEC13-209ENST00000397117 GPR183P32249 361 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 PRR20EP86478 221 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 PRR20CP86479 221 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 PRR20DP86480 221 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 PRR20BP86481 221 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 PRR20AP86496 221 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 CLEC19AQ6UXS0 136 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 COMMD1Q8N668 190 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 OR10G9Q8NGN4 311 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 OR10G7Q8NGN6 311 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
SEC13-209ENST00000397117 F8W735 103 aaPredicted RBP10.22□□□□□ -0.77
SEC13-209ENST00000397117 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 IGHV3-11P01762 117 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 LINC00869P0C866 280 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 ZP3P21754 424 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 RAB2AP61019 212 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 BLOC1S1P78537 153 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 VSIRQ9H7M9 311 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 GNB4Q9HAV0 340 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 TENM3Q9P273 2699 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 YIF1AO95070 293 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 RPLP1P05386 114 aaKnown RBP10.22□□□□□ -0.77
SEC13-209ENST00000397117 CTSGP08311 255 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 PSG1P11464 419 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 FHITP49789 147 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
SEC13-209ENST00000397117 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
SEC13-209ENST00000397117 A0A1W2PPV4 95 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 TGOLN2O43493 480 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 TOMM40O96008 361 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 GCSAMLQ5JQS6 135 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 FAM209BQ5JX69 171 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 RNF152Q8N8N0 203 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 OR51G1Q8NGK1 321 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 OR1L4Q8NGR5 311 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 Q8WTZ3 238 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.78
SEC13-209ENST00000397117 PFDN2Q9UHV9 154 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 RYR3Q15413 4870 aa10.21□□□□□ -0.78
SEC13-209ENST00000397117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.2□□□□□ -0.78
SEC13-209ENST00000397117 ADARB2-AS1A8MUL3 147 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 COX7A2P2O60397 106 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 ORM2P19652 201 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 ARL3P36405 182 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 LYZP61626 148 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 PXDC1Q5TGL8 231 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 ZNF343Q6P1L6 599 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 RPP25LQ8N5L8 163 aaKnown RBP10.2□□□□□ -0.78
SEC13-209ENST00000397117 ZNF491Q8N8L2 437 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms