RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 TOR2AQ5JU69 321 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 OR2K2Q8NGT1 345 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 SCGB1C1Q8TD33 95 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 F11RQ9Y624 299 aaKnown RBP11.08□□□□□ -0.64
SEC13-208ENST00000397109 NXPH3O95157 252 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 OR2C1O95371 312 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 IFNA17P01571 189 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 CLEC3BP05452 202 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 ATP6V0CP27449 155 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 HAPLN4Q86UW8 402 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 OR2G3Q8NGZ4 309 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 ZNF502Q8TBZ5 544 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 S4R3C0 116 aa11.07□□□□□ -0.64
SEC13-208ENST00000397109 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 PLEKHA3Q9HB20 300 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 PMS2P5A8MQ11 134 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 H3BP45 60 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 ERHP84090 104 aaKnown RBP11.06□□□□□ -0.64
SEC13-208ENST00000397109 SLC38A11Q08AI6 406 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 VWC2Q2TAL6 325 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 CCDC28AQ8IWP9 274 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 OR1P1Q8NH06 330 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 TMEM147Q9BVK8 224 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
SEC13-208ENST00000397109 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 GPR183P32249 361 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 CAMLGP49069 296 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 RAB11AP62491 216 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 BSXQ3C1V8 233 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 Q6ZRG5 221 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
SEC13-208ENST00000397109 ENY2Q9NPA8 101 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 TECRQ9NZ01 308 aaKnown RBP11.05□□□□□ -0.64
SEC13-208ENST00000397109 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
SEC13-208ENST00000397109 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 ZNF320A2RRD8 509 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 MPDU1O75352 247 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 FOLR2P14207 255 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 MFAP2P55001 183 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 RAB2AP61019 212 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 ARL16Q0P5N6 197 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 SPSB3Q6PJ21 355 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 HEYLQ9NQ87 328 aaPredicted RBP11.04□□□□□ -0.64
SEC13-208ENST00000397109 GAR1Q9NY12 217 aaKnown RBP11.04□□□□□ -0.64
SEC13-208ENST00000397109 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
SEC13-208ENST00000397109 A8MWP6 167 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 TGOLN2O43493 480 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 HBE1P02100 147 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 MBP02144 154 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 HOXA1P49639 335 aaPredicted RBP11.03□□□□□ -0.64
SEC13-208ENST00000397109 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 Q8N1Y9 231 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 HRH4Q9H3N8 390 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 UQCC1Q9NVA1 299 aa11.03□□□□□ -0.64
SEC13-208ENST00000397109 TRAV1-1A0A0B4J248 108 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 C15orf62A8K5M9 175 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 K7EIM0 57 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 CBLN1P23435 193 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
SEC13-208ENST00000397109 CD300EQ496F6 205 aaPredicted RBP11.02□□□□□ -0.65
SEC13-208ENST00000397109 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 ASCL2Q99929 193 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 PBDC1Q9BVG4 233 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
SEC13-208ENST00000397109 TMEM213A2RRL7 107 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 TMEM218A2RU14 115 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 OR2T8A6NH00 312 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 A8MZ25 164 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 C17orf112F2Z3M2 114 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 IFNA10P01566 189 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 CD5P06127 495 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 SNCAP37840 140 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 MFAP4P55083 255 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 DLK1P80370 383 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 OR8G2PQ6IF36 304 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 TMEM182Q6ZP80 229 aaPredicted RBP11.01□□□□□ -0.65
SEC13-208ENST00000397109 MISP3Q96FF7 219 aa11.01□□□□□ -0.65
SEC13-208ENST00000397109 IGHV3-21A0A0B4J1V1 117 aa11□□□□□ -0.65
SEC13-208ENST00000397109 IZUMO1RA6ND01 250 aa11□□□□□ -0.65
SEC13-208ENST00000397109 H2AFB1P0C5Y9 115 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms