RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.45
MCF2L-205ENST00000397017 FABP4P15090 132 aa12.21□□□□□ -0.46
MCF2L-205ENST00000397017 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.46
MCF2L-205ENST00000397017 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.46
MCF2L-205ENST00000397017 LINC00479Q96M42 142 aa12.21□□□□□ -0.46
MCF2L-205ENST00000397017 PRO1933Q9H354 126 aa12.21□□□□□ -0.46
MCF2L-205ENST00000397017 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 ITGB1BP1O14713 200 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
MCF2L-205ENST00000397017 RPL29P47914 159 aaKnown RBP12.2□□□□□ -0.46
MCF2L-205ENST00000397017 KIAA1644Q3SXP7 199 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 MUC21Q5SSG8 566 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 FLNCQ14315 2725 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 IGFL4Q6B9Z1 124 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 SCRT1Q9BWW7 348 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-205ENST00000397017 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 RNF2Q99496 336 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 RELNP78509 3460 aa12.2□□□□□ -0.46
MCF2L-205ENST00000397017 CD81P60033 236 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 ZNF295-AS1Q8N0V1 137 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 DDB2Q92466 427 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 TCRBV4S1A1TA0A5B7 111 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 HTN1P15515 57 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 M0R1W7 72 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 CA1P00915 261 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-205ENST00000397017 COMPP49747 757 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-205ENST00000397017 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
MCF2L-205ENST00000397017 AGAP20933 346 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
MCF2L-205ENST00000397017 GBGT1Q8N5D6 347 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
MCF2L-205ENST00000397017 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
MCF2L-205ENST00000397017 IL17RELQ6ZVW7 336 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 CHEK1O14757 476 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 IGHV2-5P01817 119 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 Q8N7P7 452 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 BEND2Q8NDZ0 799 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 OR1P1Q8NH06 330 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 TMEM250H0YL14 139 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 NCOR1P1Q9H4R4 102 aa12.18□□□□□ -0.46
MCF2L-205ENST00000397017 YTHDF2Q9Y5A9 579 aaKnown RBP12.18□□□□□ -0.46
MCF2L-205ENST00000397017 ZFHX4Q86UP3 3567 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 EXOC3-AS1Q8N2X6 119 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-205ENST00000397017 XKRY2A2RUG3 117 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 SNURFLB1AK76 121 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 SRD5A1P18405 259 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-205ENST00000397017 MFAP2P55001 183 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 IBA57Q5T440 356 aaKnown RBP12.17□□□□□ -0.46
MCF2L-205ENST00000397017 PITPNC1Q9UKF7 332 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
MCF2L-205ENST00000397017 CSN3P07498 182 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 ZNF124Q15973 351 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 OCC1Q8TAD7 63 aa12.17□□□□□ -0.46
MCF2L-205ENST00000397017 NOL4LQ96MY1 436 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-205ENST00000397017 TRAV8-1A0A0A6YYK1 113 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 BATFQ16520 125 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 B4DSR2 109 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 IGKV3-20P01619 116 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 ORM1P02763 201 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 LRBAP50851 2863 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 P01737 135 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 MSMBP08118 114 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 S100A7P31151 101 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 S100A12P80511 92 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 DPF1Q92782 380 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
MCF2L-205ENST00000397017 PMCHP20382 165 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 NDPQ00604 133 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 ZNF841Q6ZN19 808 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 USP24Q9UPU5 2620 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 B4DEV8 164 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
MCF2L-205ENST00000397017 IMMP2LQ96T52 175 aa12.15□□□□□ -0.47
MCF2L-205ENST00000397017 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.47
MCF2L-205ENST00000397017 SOX21Q9Y651 276 aaPredicted RBP12.15□□□□□ -0.47
MCF2L-205ENST00000397017 IGSF10Q6WRI0 2623 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms