RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF253O75346 499 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 YPEL3P61236 119 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 BIVMQ86UB2 503 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 BSCL2Q96G97 398 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 BPESC1Q9GZL8 116 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 BEX4Q9NWD9 120 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MEX3AA1L020 520 aaKnown RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 GGCTO75223 188 aaKnown RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 FGF8P55075 233 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MYPOPQ86VE0 399 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 OSTCQ9NRP0 149 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 LENEPQ9Y5L5 61 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 GCHFRP30047 84 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 RPL15P61313 204 aaKnown RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 PMCHL1Q16048 86 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TPTE2P1Q5T6R2 138 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 PET117Q6UWS5 81 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 OR4X2Q8NGF9 303 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 PRR13Q9NZ81 148 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ANOS1P23352 680 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 AMTP48728 403 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF343Q6P1L6 599 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 SRD5A3Q9H8P0 318 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 A0A1B0GUT8 65 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 KCNS1Q96KK3 526 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 C16orf92Q96LL3 132 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 HSPB8Q9UJY1 196 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 RFNGQ9Y644 331 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 LOC102723971A0A1B0GUV8 181 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CTRB1P17538 263 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SAA4P35542 130 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CTRB2Q6GPI1 263 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 RBPMS2Q6ZRY4 209 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 A0A1W2PPE3 182 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PGPA6NDG6 321 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 F2Z2F3 143 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 IGLV1-47P01700 117 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 HLA-DRB1P01911 266 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 FCGR2BP31994 310 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 VWC2Q2TAL6 325 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 GPHA2Q96T91 129 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PF4V1P10720 104 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 LOXP28300 417 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 C15orf32Q32M92 178 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 C9orf139Q6ZV77 190 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 NPFFO15130 113 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 IL6RP08887 468 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PAX1P15863 534 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 TM4SF20Q53R12 229 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 NEUROG1Q92886 237 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF48Q96MX3 618 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 UFC1Q9Y3C8 167 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 HBBP68871 147 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 HOXA4Q00056 320 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 C17orf58Q2M2W7 97 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 GBGT1Q8N5D6 347 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 TPPP3Q9BW30 176 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 DAZ1Q9NQZ3 744 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV2-70DA0A0C4DH43 119 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 TRGV3P03979 118 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 H7C1H1 209 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CGB3P0DN86 165 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CGB7P0DN87 165 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PRSS57Q6UWY2 283 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZCCHC24Q8N2G6 241 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 BLNKQ8WV28 456 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 GNB1LQ9BYB4 327 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 AP5S1Q9NUS5 200 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 DCHS2Q6V1P9 2916 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SH2D7A6NKC9 451 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 C15orf62A8K5M9 175 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 NPIPB5A8MRT5 1133 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SNURFLB1AK76 121 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ARL3P36405 182 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PLA2G5P39877 138 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 Q6ZRM9 215 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 FA2HQ7L5A8 372 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF439Q8NDP4 499 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM208Q9BTX3 173 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 NIT2Q9NQR4 276 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF705FA8MVS1 300 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF705DP0CH99 300 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 RPL35P42766 123 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SNRPEP62304 92 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 OR2D3Q8NGH3 330 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PRSS3P2Q8NHM4 247 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 METRNQ9UJH8 293 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 RPH3ALQ9UNE2 315 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 A0A1W2PPI3 338 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SRSF2Q01130 221 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SPINK9Q5DT21 86 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 LEAP2Q969E1 77 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SDF2L1Q9HCN8 221 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 LAMTOR2Q9Y2Q5 125 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 FABP5P3A8MUU1 101 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PEX7O00628 323 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 WNT10AQ9GZT5 417 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms