RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
SNCA-204ENST00000394989 PDLIM4P50479 330 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 SUB1P53999 127 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-204ENST00000394989 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 THAP8Q8NA92 274 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 IGFBPL1Q8WX77 278 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 RPEQ96AT9 228 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 C20orf202A1L168 122 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 GGTLC3B5MD39 225 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 ARF6P62330 175 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 STPG4Q8N801 248 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 TMEM167BQ9NRX6 74 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 TCRBV4S1A1TA0A5B7 111 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 FCN1O00602 326 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 CRYGCP07315 174 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 SRP14P37108 136 aaKnown RBP11.15□□□□□ -0.62
SNCA-204ENST00000394989 RPL27AP46776 148 aaKnown RBP11.15□□□□□ -0.62
SNCA-204ENST00000394989 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
SNCA-204ENST00000394989 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 CRISP2P16562 243 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 FBXL15Q9H469 300 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 M0QZK8 103 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 IER3P46695 156 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 UNQ5815/PRO19632Q6UWF5 114 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 DTX2Q86UW9 622 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 CFAP46Q8IYW2 2715 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 Q6ZN92 141 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 TIMD4Q96H15 378 aa11.14□□□□□ -0.63
SNCA-204ENST00000394989 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
SNCA-204ENST00000394989 CBY3A6NI87 242 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 TIMM23O14925 209 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 NTF3P20783 257 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 CRYBB3P26998 211 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 TPPP2P59282 170 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 TAS2R45P59539 299 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 KLRD1Q13241 179 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 OR11H6Q8NGC7 330 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 NEU4Q8WWR8 484 aaPredicted RBP11.13□□□□□ -0.63
SNCA-204ENST00000394989 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
SNCA-204ENST00000394989 C9JCJ5 164 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 CCL25O15444 150 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 NDUFS7O75251 213 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 SSBP3Q9BWW4 388 aaPredicted RBP11.13□□□□□ -0.63
SNCA-204ENST00000394989 CHODLQ9H9P2 273 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 TP53TG3Q9ULZ0 132 aa11.13□□□□□ -0.63
SNCA-204ENST00000394989 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 MOSP00540 346 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 TYMSP04818 313 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 TCL1AP56279 114 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
SNCA-204ENST00000394989 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 PKD1L2Q7Z442 2459 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 LINC00614P0C842 121 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 PYYP10082 97 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
SNCA-204ENST00000394989 COTL1Q14019 142 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 DIRC3C9JPN6 131 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 CFHR4Q92496 578 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
SNCA-204ENST00000394989 LOC105371242A0A075B767 164 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 HTR1DP28221 377 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 SUMO1P63165 101 aaKnown RBP11.11□□□□□ -0.63
SNCA-204ENST00000394989 FOXL1Q12952 345 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
SNCA-204ENST00000394989 MRPL18Q9H0U6 180 aaKnown RBP11.11□□□□□ -0.63
SNCA-204ENST00000394989 FBXL7Q9UJT9 491 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
SNCA-204ENST00000394989 ODF3BA8MYP8 253 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 SNURFLB1AK76 121 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 AMTP48728 403 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
SNCA-204ENST00000394989 A0A1W2PRE2 83 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 CD24P25063 80 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
SNCA-204ENST00000394989 LCN2P80188 198 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
SNCA-204ENST00000394989 DPM3Q9P2X0 92 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms