RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MYCNOSP40205 109 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 MMDQ15546 238 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 TNXAQ16473 311 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 PDPNQ86YL7 162 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 VSTM2AQ8TAG5 236 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 BORCS7Q96B45 105 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 COL5A1-AS1Q5SY13 56 aa14.75□□□□□ -0.05
PCDHA1-202ENST00000394633 LINC00305Q7Z4B0 112 aa14.75□□□□□ -0.05
PCDHA1-202ENST00000394633 NUP37Q8NFH4 326 aa14.75□□□□□ -0.05
PCDHA1-202ENST00000394633 PLXNB1O43157 2135 aa14.75□□□□□ -0.05
PCDHA1-202ENST00000394633 ZFYVE26Q68DK2 2539 aa14.75□□□□□ -0.05
PCDHA1-202ENST00000394633 SUB1P53999 127 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 KLF5Q13887 457 aaPredicted RBP14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 OR10X1Q8NGY0 326 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 CLEC7AQ9BXN2 247 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 VWC2LB2RUY7 222 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 TNFRSF1AP19438 455 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 RUSC1-AS1Q66K80 236 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 LCN12Q6JVE5 192 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 ATOH7Q8N100 152 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 SSBP4Q9BWG4 385 aaPredicted RBP14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 TPSG1Q9NRR2 321 aa14.74□□□□□ -0.05
PCDHA1-202ENST00000394633 A0A1W2PPI3 338 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 GPR6P46095 362 aaPredicted RBP14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 H1FXQ92522 213 aaKnown RBP14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 ALKBH7Q9BT30 221 aaPredicted RBP14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 PPIAL4AQ9Y536 164 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 C17orf100A8MU93 164 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 HIGD1CA8MV81 97 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 C22orf46C9J442 243 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 OR2J3O76001 311 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 MRGPRG-AS1Q2M3A8 158 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 MAJINQ3KP22 176 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 ST6GALNAC6Q969X2 333 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 SGK494Q96LW2 274 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 TXN2Q99757 166 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 CHRDL1Q9BU40 450 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 SAP30LQ9HAJ7 183 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 EPDR1Q9UM22 224 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 WASHC3Q9Y3C0 194 aa14.73□□□□□ -0.05
PCDHA1-202ENST00000394633 SLC25A17O43808 307 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 HSBP1O75506 76 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 MOSP00540 346 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 HIST1H1EP10412 219 aaKnown RBP14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 FAM71F2Q6NXP2 309 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 Q6ZN92 141 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 LHFPL4Q7Z7J7 247 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 BLNKQ8WV28 456 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 TMEM186Q96B77 213 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 RITA1Q96K30 269 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 TNFRSF19Q9NS68 423 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 SLC25A5P05141 298 aaKnown RBP14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 UBE2G1P62253 170 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 ADIPOQQ15848 244 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 LYPD2Q6UXB3 125 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 LINC00311Q8N616 119 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 ZNF596Q8TC21 504 aa14.72□□□□□ -0.05
PCDHA1-202ENST00000394633 CACNA1BQ00975 2339 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 A0A1B0GXF2 115 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 ORM2P19652 201 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 CAMPP49913 170 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 HNRNPA3P51991 378 aaKnown RBP14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 EBLN2Q6P2I7 272 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 STPG4Q8N801 248 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 EPG5Q9HCE0 2579 aa14.71□□□□□ -0.05
PCDHA1-202ENST00000394633 PGPA6NDG6 321 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 FAM181BA6NEQ2 426 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 M0R2Z0 102 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 LINC00614P0C842 121 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 BTF3P20290 206 aaKnown RBP14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 PERPQ96FX8 193 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 KLF12Q9Y4X4 402 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 HIVEP3Q5T1R4 2406 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 PPIAL4EA0A075B759 164 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 PPIAL4DF5H284 164 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 TMEM178BH3BS89 294 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 PPIAL4FP0DN26 164 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 PRR31Q5SQ13 230 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 RNASEKQ6P5S7 137 aaKnown RBP14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 TMEM108Q6UXF1 575 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 ATP5L2Q7Z4Y8 100 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 KLHDC1Q8N7A1 406 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 OR1B1Q8NGR6 318 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 RPH3ALQ9UNE2 315 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 LAMTOR2Q9Y2Q5 125 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 COL12A1Q99715 3063 aa14.7□□□□□ -0.06
PCDHA1-202ENST00000394633 ROS1P08922 2347 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 CRYGCP07315 174 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 PMCHL1Q16048 86 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 VMA21Q3ZAQ7 101 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 HCP5Q6MZN7 132 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 LINC00322Q6ZN03 302 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 TCF24Q7RTU0 167 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 C8orf31Q8N9H6 132 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 OR8B3Q8NGG8 313 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 OR8B2Q96RD0 313 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 MLST8Q9BVC4 326 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 ZFP30Q9Y2G7 519 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 IGLC7A0M8Q6 106 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 TNFRSF13BO14836 293 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms