RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 CCL3L1P16619 93 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 WT1P19544 449 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-203ENST00000393211 TFPI2P48307 235 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 SRSF6Q13247 344 aaKnown RBP8.03□□□□□ -1.12
COL17A1-203ENST00000393211 PRR27Q6MZM9 219 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 ZNF841Q6ZN19 808 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 Q6ZS92 163 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 MUC15Q8N387 334 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 ZNF738Q8NE65 137 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 DAZAP1Q96EP5 407 aaKnown RBP8.03□□□□□ -1.12
COL17A1-203ENST00000393211 OTORQ9NRC9 128 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 TMEM14CQ9P0S9 112 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 KAAG1Q9UBP8 84 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 RNF24Q9Y225 148 aa8.03□□□□□ -1.12
COL17A1-203ENST00000393211 ZDBF2Q9HCK1 2354 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 VWC2LB2RUY7 222 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 TCRAP04437 139 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 FTH1P19P0C7X4 201 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 IGLL1P15814 213 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 CAMPP49913 170 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 DLX6P56179 175 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 GNG5P63218 68 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 MRGPRG-AS1Q2M3A8 158 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 Q56UQ5 140 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 LCN12Q6JVE5 192 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 OR1B1Q8NGR6 318 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 FAM57AQ8TBR7 257 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 COX11Q9Y6N1 276 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 PCNX2A6NKB5 2137 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 TNCP24821 2201 aa8.02□□□□□ -1.13
COL17A1-203ENST00000393211 A0A1B0GW15 77 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 LIPFP07098 398 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 ORM2P19652 201 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 RPL27AP46776 148 aaKnown RBP8.01□□□□□ -1.13
COL17A1-203ENST00000393211 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-203ENST00000393211 CCL8P80075 99 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 ADIPOQQ15848 244 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 TMEM155Q4W5P6 130 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 C10orf55Q5SWW7 151 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 FAM120AOSQ5T036 256 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 C16orf54Q6UWD8 224 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 OR4F17Q8NGA8 305 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-203ENST00000393211 TMEM191AQ9H0A3 160 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 Q9H3A6 140 aa8.01□□□□□ -1.13
COL17A1-203ENST00000393211 MRPL36Q9P0J6 103 aaKnown RBP8.01□□□□□ -1.13
COL17A1-203ENST00000393211 LOC102724200A0A096LPH7 203 aaPredicted RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 TCF21O43680 179 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 SLC25A17O43808 307 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 CRYGBP07316 175 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 HOXB4P17483 251 aaPredicted RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 GPR6P46095 362 aaPredicted RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 PTTG1IPP53801 180 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 FAM27E3Q08E93 113 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 PET117Q6UWS5 81 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 ATOH7Q8N100 152 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 GATD1Q8NB37 220 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 BLNKQ8WV28 456 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 GTSF1Q8WW33 167 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 H1FXQ92522 213 aaKnown RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 SRSF8Q9BRL6 282 aaKnown RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 MS4A6AQ9H2W1 248 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 HIGD1AQ9Y241 93 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 OR4C46A6NHA9 309 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 C16orf97H3BN30 126 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 CHEK1O14757 476 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 FCN3O75636 299 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 LEPROTL1O95214 131 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 HINT1P49773 126 aaPredicted RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 LEMD1Q68G75 181 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 TCF24Q7RTU0 167 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 Q86TA4 180 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 RPRMLQ8N4K4 120 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 RNF5Q99942 180 aa8□□□□□ -1.13
COL17A1-203ENST00000393211 F11RQ9Y624 299 aaKnown RBP8□□□□□ -1.13
COL17A1-203ENST00000393211 MUC3AQ02505 3323 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 IGHV1-24A0A0C4DH33 117 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 K7EP13 123 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 PLAUP00749 431 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 HLA-DRB1P01911 266 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 IGHV1-8P0DP01 117 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 LOXP28300 417 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-203ENST00000393211 DIAPH2-AS1Q14236 149 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 MAJINQ3KP22 176 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 Q6AWC8 147 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 LINC00322Q6ZN03 302 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-203ENST00000393211 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 PGLYRP4Q96LB8 373 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 TMEM133Q9H2Q1 129 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
COL17A1-203ENST00000393211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.98□□□□□ -1.13
COL17A1-203ENST00000393211 CCL25O15444 150 aa7.98□□□□□ -1.13
COL17A1-203ENST00000393211 COL8A1P27658 744 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms