RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 VPREB3Q9UKI3 123 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 TRAV24A0A0B4J272 114 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 B9A039 149 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 GNG5P63218 68 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 C12orf74Q32Q52 190 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 C11orf1Q9H5F2 150 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 C12orf49Q9H741 205 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 PGPA6NDG6 321 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 NPIPB6E9PJ23 425 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 PEX7O00628 323 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 IGHMP01871 453 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 RRN3P1Q2M238 152 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 CEND1Q8N111 149 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 C1orf162Q8NEQ5 155 aaPredicted RBP6.29□□□□□ -1.4
VTI1A-201ENST00000393077 SRSF12Q8WXF0 261 aaKnown RBP6.29□□□□□ -1.4
VTI1A-201ENST00000393077 PLPPR2Q96GM1 343 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 PPDPFQ9H3Y8 114 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 IDI2-AS1Q9NZ38 188 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 PMS2CLQ68D20 193 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 Q6AWC8 147 aa6.29□□□□□ -1.4
VTI1A-201ENST00000393077 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 TCRBV4S1A1TA0A5B7 111 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A10PA6NDY2 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A18PA6NE21 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A16PA6NEW6 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 SMIM9A6NGZ8 99 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A20PA6NIJ5 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A8PA6NJQ4 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 LIPT2A6NK58 231 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A7PA6NKC0 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A22PA8MWA6 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A12PA8MX19 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A5PA8MXJ8 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A23PA8MXZ1 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 NGFP01138 241 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 IGHV3-9P01782 118 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 IGKCP01834 107 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A15PP0C7V4 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A13PP0C7W8 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A14PP0C7W9 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FAM90A24PP0C7X0 464 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 CCL1P22362 96 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FXYD7P58549 80 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FNDC7Q5VTL7 733 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 C15orf53Q8NAA6 179 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 EDA2RQ9HAV5 297 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 ZNF106Q9H2Y7 1883 aaKnown RBP6.28□□□□□ -1.4
VTI1A-201ENST00000393077 PCDH15Q96QU1 1955 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 IGHV5-10-1A0A0J9YXX1 117 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 SMIM10L1P0DMW3 83 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 B4GALT1P15291 398 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 FGF12P61328 243 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 LGALS9BQ3B8N2 356 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 ZC2HC1BQ5TFG8 222 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 AAED1Q7RTV5 226 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 RFESDQ8TAC1 157 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 SMIM10Q96HG1 83 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 BEX4Q9NWD9 120 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-201ENST00000393077 TRAV25A0A0B4J276 109 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 IGHV3-64DA0A0J9YX35 117 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 DEFB108AA8MXU0 73 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 DPM2O94777 84 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 PATE4P0C8F1 98 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 SPINK2P20155 84 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 DUX4L9Q6RFH8 374 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-201ENST00000393077 TREML4Q6UXN2 200 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 CIARTQ8N365 385 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-201ENST00000393077 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 RTL8AQ9BWD3 113 aa6.28□□□□□ -1.4
VTI1A-201ENST00000393077 K7EMI3 77 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 FAM106CPP0CH98 169 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 ASIPP42127 132 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 ZNF146Q15072 292 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 FAM106AQ4KMX7 169 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 C10orf113Q5VZT2 155 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 OR2H1Q9GZK4 316 aa6.27□□□□□ -1.4
VTI1A-201ENST00000393077 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 F5H768 121 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF32P17041 273 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ORM2P19652 201 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-201ENST00000393077 KLRB1Q12918 225 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF56Q15929 161 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 PRNTQ86SH4 94 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ODF3L1Q8IXM7 274 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 WIPF2Q8TF74 440 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-201ENST00000393077 C11orf52Q96A22 123 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 COQ2Q96H96 371 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 SLC25A2Q9BXI2 301 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 POLDIP2Q9Y2S7 368 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF407Q9C0G0 2248 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 C9JAW5 83 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 MOSP00540 346 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 PLA2G5P39877 138 aa6.27□□□□□ -1.41
VTI1A-201ENST00000393077 SUB1P53999 127 aaKnown RBP eCLIP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms