RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.84□□□□□ -0.67
LCA5-202ENST00000392959 TMEM262E9PQX1 116 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 NTN3O00634 580 aaPredicted RBP10.84□□□□□ -0.67
LCA5-202ENST00000392959 TIMM23O14925 209 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 RHOGP84095 191 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 CLPSP04118 112 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 SLC25A48Q6ZT89 311 aaKnown RBP10.83□□□□□ -0.68
LCA5-202ENST00000392959 C5orf24Q7Z6I8 188 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 TNFRSF14Q92956 283 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 VCX2Q9H322 139 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 C7orf69Q9H7B7 122 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 GZMBP10144 247 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 SEC11AP67812 179 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 JMJD8Q96S16 334 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 TRAV21A0A0B4J279 112 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 CD7P09564 240 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
LCA5-202ENST00000392959 MGST2Q99735 147 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 LYNX1G3V0Z9 82 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 LYNX1P0DP58 116 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 LYL1P12980 280 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 ADCYAP1P18509 176 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 ORMDL2Q53FV1 153 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 RNASE6Q93091 150 aaKnown RBP10.83□□□□□ -0.68
LCA5-202ENST00000392959 TOMM7Q9P0U1 55 aa10.83□□□□□ -0.68
LCA5-202ENST00000392959 TRBV6-6A0A0A6YYG2 114 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 MS4A6AQ9H2W1 248 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 NPIPB5A8MRT5 1133 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 IFI27P40305 119 aaPredicted RBP10.82□□□□□ -0.68
LCA5-202ENST00000392959 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 F2Z2F3 143 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 FAM168AQ92567 244 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 DOCK8Q8NF50 2099 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 A6NNC1 897 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 PMS2P5A8MQ11 134 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 HSD52Q0P140 79 aa10.82□□□□□ -0.68
LCA5-202ENST00000392959 CDKN1AP38936 164 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 IL18BPO95998 194 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 ZNF407Q9C0G0 2248 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 TRAV3A0A0B4J244 114 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 GFRA3O60609 400 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 IGKCP01834 107 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 PSG1P11464 419 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 EVI2AP22794 236 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 ACTL10Q5JWF8 245 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 RASL11AQ6T310 242 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 LINC01587Q99440 93 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
LCA5-202ENST00000392959 TRAV8-2A0A0B4J237 113 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 MYOD1P15172 320 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 Q6ZS49 121 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 CNTFRP26992 372 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 CRIM1Q9NZV1 1036 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 TCRAP04437 139 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 NTF4P34130 210 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 BRWD3Q6RI45 1802 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 A0A0G2JRQ6 117 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 TRBV7-9A0A0J9YWB2 115 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 LINC00473A8K010 186 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 Q6ZRM9 215 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 CD177Q8N6Q3 437 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 OR9G4Q8NGQ1 327 aa10.8□□□□□ -0.68
LCA5-202ENST00000392959 DLEU1O43261 78 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 FHL1Q13642 323 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 LHFPL4Q7Z7J7 247 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 PLSCR4Q9NRQ2 329 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 METRNQ9UJH8 293 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 DOCK11Q5JSL3 2073 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 ZNF815PA8K554 130 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 HOXA3O43365 443 aaPredicted RBP10.79□□□□□ -0.68
LCA5-202ENST00000392959 PF4P02776 101 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 TMEM190Q8WZ59 177 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 A0A1B0GWJ7 208 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 C15orf62A8K5M9 175 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 MLNRO43193 412 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 Q6P435 159 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 SCRT1Q9BWW7 348 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 SMPXQ9UHP9 88 aa10.79□□□□□ -0.68
LCA5-202ENST00000392959 ERVK11-1P61568 191 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 SLC25A39Q9BZJ4 359 aaPredicted RBP10.78□□□□□ -0.68
LCA5-202ENST00000392959 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
LCA5-202ENST00000392959 LILRA1O75019 489 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 MST1LQ2TV78 715 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 C9JQL5 133 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 CD33P20138 364 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 PLAURQ03405 335 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms