RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 C19orf35Q6ZS72 473 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 CCDC168Q8NDH2 2452 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 UQCRFS1P47985 274 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 PTTG1IPP53801 180 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 REG4Q9BYZ8 158 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 TUBA4BQ9H853 241 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 HBBP68871 147 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 NDUFS8O00217 210 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 GGCTO75223 188 aaKnown RBP9.94□□□□□ -0.82
GABPB1-203ENST00000380877 SLC25A16P16260 332 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 PAX9P55771 341 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 SP5Q6BEB4 398 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-203ENST00000380877 Q6ZN92 141 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 LHFPL4Q7Z7J7 247 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 TRGV9Q99603 122 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 TMEM14BQ9NUH8 114 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 KAAG1Q9UBP8 84 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 CDC42EP3Q9UKI2 254 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 A0A1W2PPI3 338 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 KIR3DL3Q8N743 410 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 RAX2Q96IS3 184 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 CYYR1Q96J86 154 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 AGMATQ9BSE5 352 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 RNASE7Q9H1E1 156 aaKnown RBP9.94□□□□□ -0.82
GABPB1-203ENST00000380877 GSX1Q9H4S2 264 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-203ENST00000380877 IGHV3OR16-12A0A075B7B8 117 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 SOD3P08294 240 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 ZNF833PQ6ZTB9 187 aa9.94□□□□□ -0.82
GABPB1-203ENST00000380877 TRAV20A0A0B4J274 112 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 CDX1P47902 265 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 CIARTQ8N365 385 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 LINC00311Q8N616 119 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 PAM16Q9Y3D7 125 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 ANKRD11Q6UB99 2663 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 TBX15Q96SF7 602 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 PAX8Q06710 450 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 SPRNQ5BIV9 151 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 SYT8Q8NBV8 401 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 SLC50A1Q9BRV3 221 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 TDGF1P3P51864 188 aa9.93□□□□□ -0.82
GABPB1-203ENST00000380877 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-203ENST00000380877 MED12LQ86YW9 2145 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 A0A1B0GW64 132 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 UBE2E1P51965 193 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 PARD6GQ9BYG4 376 aaPredicted RBP9.92□□□□□ -0.82
GABPB1-203ENST00000380877 A0A1B0GUT8 65 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 PMS2P5A8MQ11 134 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 PF4P02776 101 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 Q8NA96 180 aa9.92□□□□□ -0.82
GABPB1-203ENST00000380877 A0A087X0M5 115 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 A0A1B0GX30 115 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 MSMBP08118 114 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 IMMP2LQ96T52 175 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 SLC25A39Q9BZJ4 359 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-203ENST00000380877 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 TCAPO15273 167 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 NDUFS7O75251 213 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 NAV2Q8IVL1 2488 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 ZNF562Q6V9R5 426 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 SPTBN4Q9H254 2564 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
GABPB1-203ENST00000380877 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 CNTFRP26992 372 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 TEX38Q6PEX7 206 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
GABPB1-203ENST00000380877 HIGD1CA8MV81 97 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 LHBP01229 141 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 IL15RAQ13261 267 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 MUC21A0A0G2JKD1 596 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 MUC21A0A140T8X8 626 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 A0A1W2PRX2 142 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 BTF3P20290 206 aaKnown RBP9.9□□□□□ -0.82
GABPB1-203ENST00000380877 MUC21Q5SSG8 566 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 LINC01356Q8N9X3 169 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 EML6Q6ZMW3 1958 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
GABPB1-203ENST00000380877 TRAV9-1A0A075B6T8 112 aa9.9□□□□□ -0.83
GABPB1-203ENST00000380877 ZNF841Q6ZN19 808 aa9.9□□□□□ -0.83
GABPB1-203ENST00000380877 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.83
GABPB1-203ENST00000380877 RPL15P61313 204 aaKnown RBP9.89□□□□□ -0.83
GABPB1-203ENST00000380877 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 VAMP3Q15836 100 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 MST1LQ2TV78 715 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 DERL1Q9BUN8 251 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 ZFP30Q9Y2G7 519 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 C22orf46C9J442 243 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 RNF223E7ERA6 249 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms