RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 NTF3P20783 257 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 LAMA5O15230 3695 aa13.08□□□□□ -0.32
VPS16-203ENST00000380469 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 APELAP0DMC3 54 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 CA7P43166 264 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 SPATA45Q537H7 98 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 NIT1Q86X76 327 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 ZGRF1Q86YA3 2104 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 C3orf79P0CE67 100 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 CAMPP49913 170 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 CASP6P55212 293 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 LHFPL4Q7Z7J7 247 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 RALYQ9UKM9 306 aaKnown RBP13.07□□□□□ -0.32
VPS16-203ENST00000380469 SIGLEC9Q9Y336 463 aa13.07□□□□□ -0.32
VPS16-203ENST00000380469 SMG1Q96Q15 3661 aaKnown RBP13.06□□□□□ -0.32
VPS16-203ENST00000380469 MAP1BP46821 2468 aaKnown RBP13.06□□□□□ -0.32
VPS16-203ENST00000380469 IGHV3-21A0A0B4J1V1 117 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 IGHV2-26A0A0B4J1V2 119 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 CRYGBP07316 175 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 CNTFRP26992 372 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 G0S2P27469 103 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 KLF5Q13887 457 aaPredicted RBP13.06□□□□□ -0.32
VPS16-203ENST00000380469 C5orf17Q8NAS9 161 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 HSBP1O75506 76 aa13.06□□□□□ -0.32
VPS16-203ENST00000380469 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
VPS16-203ENST00000380469 TOMM40O96008 361 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 FAM87AP0C7U9 286 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 PRSS33Q8NF86 280 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 RPP21Q9H633 154 aaKnown RBP13.05□□□□□ -0.32
VPS16-203ENST00000380469 ZNF835Q9Y2P0 537 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 IGHV1-3A0A0C4DH29 117 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 A8MWL6 223 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 OR2J3O76001 311 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 GP9P14770 177 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
VPS16-203ENST00000380469 CTRLP40313 264 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 GPR6P46095 362 aaPredicted RBP13.05□□□□□ -0.32
VPS16-203ENST00000380469 PLP1P60201 277 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 ZNF124Q15973 351 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 Q8NA96 180 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 ALKBH7Q9BT30 221 aaPredicted RBP13.05□□□□□ -0.32
VPS16-203ENST00000380469 CLEC7AQ9BXN2 247 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
VPS16-203ENST00000380469 F11RQ9Y624 299 aaKnown RBP13.05□□□□□ -0.32
VPS16-203ENST00000380469 PLXNB1O43157 2135 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 B9A039 149 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 IGLV1-47P01700 117 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 DAZAP1Q96EP5 407 aaKnown RBP13.04□□□□□ -0.32
VPS16-203ENST00000380469 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
VPS16-203ENST00000380469 Q9H3A6 140 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 P01737 135 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 PAX2Q02962 417 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 BATFQ16520 125 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 UQCR10Q9UDW1 63 aa13.04□□□□□ -0.32
VPS16-203ENST00000380469 A0A1B0GXF2 115 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 M0R2Z0 102 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 LTAP01374 205 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 TCRAP04437 139 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 HBBP68871 147 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 CT83Q5H943 113 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 TCF24Q7RTU0 167 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 OR2D3Q8NGH3 330 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 RBM14Q96PK6 669 aaKnown RBP13.03□□□□□ -0.32
VPS16-203ENST00000380469 ZNF492Q9P255 531 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
VPS16-203ENST00000380469 H3BTX0 84 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 CD3EP07766 207 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 DLX1P56177 255 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 MMDQ15546 238 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 RNASEKQ6P5S7 137 aaKnown RBP13.02□□□□□ -0.32
VPS16-203ENST00000380469 KLHDC1Q8N7A1 406 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 PRSS22Q9GZN4 317 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 GSX1Q9H4S2 264 aaPredicted RBP13.02□□□□□ -0.32
VPS16-203ENST00000380469 SOX21Q9Y651 276 aaPredicted RBP13.02□□□□□ -0.32
VPS16-203ENST00000380469 AKAP13Q12802 2813 aa13.02□□□□□ -0.32
VPS16-203ENST00000380469 ZNF292O60281 2723 aa13.02□□□□□ -0.33
VPS16-203ENST00000380469 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
VPS16-203ENST00000380469 LYZP61626 148 aa13.02□□□□□ -0.33
VPS16-203ENST00000380469 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.33
VPS16-203ENST00000380469 PMCHL1Q16048 86 aa13.02□□□□□ -0.33
VPS16-203ENST00000380469 FAM162BQ5T6X4 162 aa13.02□□□□□ -0.33
VPS16-203ENST00000380469 RPEQ96AT9 228 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms