RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF48Q96MX3 618 aaPredicted RBP18.32■□□□□ 0.52
VPS16-201ENST00000380443 IL36BQ9NZH7 164 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 PITPNC1Q9UKF7 332 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 CDC42EP3Q9UKI2 254 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 HIGD1AQ9Y241 93 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 SPTBN1Q01082 2364 aaKnown RBP18.31■□□□□ 0.52
VPS16-201ENST00000380443 K7EIM0 57 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 K7EN84 100 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 TTC9CQ8N5M4 171 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 SGMS2Q8NHU3 365 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 ARPC1AQ92747 370 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 OSTCQ9NRP0 149 aa18.31■□□□□ 0.52
VPS16-201ENST00000380443 GCGP01275 180 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 CNN1P51911 297 aaKnown RBP18.3■□□□□ 0.52
VPS16-201ENST00000380443 RUSC1-AS1Q66K80 236 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 C19orf35Q6ZS72 473 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 S100A7AQ86SG5 101 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 TBX15Q96SF7 602 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 UTP20O75691 2785 aaKnown RBP18.3■□□□□ 0.52
VPS16-201ENST00000380443 A0A1W2PRD5 423 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 A0A1W2PRF3 423 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 A0A1W2PRM7 423 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 PYYP10082 97 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 TMEM11P17152 192 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 ZNF329Q86UD4 541 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 TMEM14CQ9P0S9 112 aa18.3■□□□□ 0.52
VPS16-201ENST00000380443 PSG1P11464 419 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 MYCNOSP40205 109 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 CX3CL1P78423 397 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 RPL19P84098 196 aaKnown RBP18.29■□□□□ 0.52
VPS16-201ENST00000380443 SPTAN1Q13813 2472 aaKnown RBP18.29■□□□□ 0.52
VPS16-201ENST00000380443 ACTL10Q5JWF8 245 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 DYNAPQ8N1N2 210 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 RNF24Q9Y225 148 aa18.29■□□□□ 0.52
VPS16-201ENST00000380443 NDUFS8O00217 210 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 ISLRO14498 428 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 IGF2BP2-AS1Q96M15 143 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 THYN1Q9P016 225 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 ARHGAP32A7KAX9 2087 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 IGHV3-21A0A0B4J1V1 117 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 A0A0U1RQK1 487 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 ZNF320A2RRD8 509 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 NCBP2LA6PVI3 153 aaKnown RBP18.28■□□□□ 0.52
VPS16-201ENST00000380443 PEX7O00628 323 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 IGHV4-39P01824 125 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 NBEAP1P0C6P0 100 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 RD3LP0DJH9 198 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 ERVFC1-1P60608 527 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 SPOCK3Q9BQ16 436 aa18.28■□□□□ 0.52
VPS16-201ENST00000380443 COX6B1P14854 86 aa18.27■□□□□ 0.52
VPS16-201ENST00000380443 CD24P25063 80 aa18.27■□□□□ 0.52
VPS16-201ENST00000380443 S100A2P29034 98 aa18.27■□□□□ 0.52
VPS16-201ENST00000380443 SMIM12Q96EX1 92 aa18.27■□□□□ 0.52
VPS16-201ENST00000380443 RBM14Q96PK6 669 aaKnown RBP18.27■□□□□ 0.52
VPS16-201ENST00000380443 PIMREGQ9BSJ6 248 aa18.27■□□□□ 0.52
VPS16-201ENST00000380443 GAR1Q9NY12 217 aaKnown RBP18.27■□□□□ 0.52
VPS16-201ENST00000380443 MRPL27Q9P0M9 148 aaKnown RBP18.27■□□□□ 0.52
VPS16-201ENST00000380443 IGLV11-55A0A075B6I3 123 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 TOMM40O96008 361 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 IGKV1-17P01599 117 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 HNF1AP20823 631 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 COL8A1P27658 744 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 YPEL3P61236 119 aaPredicted RBP18.26■□□□□ 0.51
VPS16-201ENST00000380443 COA6Q5JTJ3 125 aaKnown RBP18.26■□□□□ 0.51
VPS16-201ENST00000380443 PTPN13Q12923 2485 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 SCGB2A1O75556 95 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 HLA-DRB1P01911 266 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 GP9P14770 177 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 MFAP4P55083 255 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 RPEL1Q2QD12 228 aa18.26■□□□□ 0.51
VPS16-201ENST00000380443 IGLV2-8P01709 118 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 LYZP61626 148 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 HIST3H2BBQ8N257 126 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 TMEM68Q96MH6 324 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 CCL19Q99731 98 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 EPDR1Q9UM22 224 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 V9GYV3 84 aa18.25■□□□□ 0.51
VPS16-201ENST00000380443 HRNRQ86YZ3 2850 aaPredicted RBP18.25■□□□□ 0.51
VPS16-201ENST00000380443 RPL15P61313 204 aaKnown RBP18.24■□□□□ 0.51
VPS16-201ENST00000380443 CLEC12BQ2HXU8 276 aa18.24■□□□□ 0.51
VPS16-201ENST00000380443 ASPHD1Q5U4P2 390 aa18.24■□□□□ 0.51
VPS16-201ENST00000380443 AJUBAQ96IF1 538 aa18.24■□□□□ 0.51
VPS16-201ENST00000380443 SLC25A39Q9BZJ4 359 aaPredicted RBP18.24■□□□□ 0.51
VPS16-201ENST00000380443 HIST1H1BP16401 226 aaKnown RBP18.23■□□□□ 0.51
VPS16-201ENST00000380443 TMEM183BQ1AE95 376 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 COX19Q49B96 90 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 FANCD2OSQ96PS1 177 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 CHRDL1Q9BU40 450 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 ASH1LQ9NR48 2969 aaKnown RBP18.23■□□□□ 0.51
VPS16-201ENST00000380443 NPFFO15130 113 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 HIST1H1EP10412 219 aaKnown RBP18.23■□□□□ 0.51
VPS16-201ENST00000380443 S100A12P80511 92 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 PAX8Q06710 450 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 KLK9Q2XQG4 91 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 FAM231DQ6ZW35 169 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 C5orf17Q8NAS9 161 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 FAM168AQ92567 244 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 TXN2Q99757 166 aa18.23■□□□□ 0.51
VPS16-201ENST00000380443 FAM103A1Q9BTL3 118 aaKnown RBP18.23■□□□□ 0.51
VPS16-201ENST00000380443 GSX1Q9H4S2 264 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms