RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 CSMD1Q96PZ7 3565 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 PYYP10082 97 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 STXBP6Q8NFX7 210 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 FXYD5Q96DB9 178 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 TMEM68Q96MH6 324 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 S4R3C0 116 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 TRAV30A0A087WSZ9 112 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 GGTLC3B5MD39 225 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 OR2J3O76001 311 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 MT-ND4LP03901 98 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 Q5PR19 223 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 MAPK1IP1LQ8NDC0 245 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 HIGD1AQ9Y241 93 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 POLQO75417 2590 aa12.07□□□□□ -0.48
RAB3IP-204ENST00000378815 TOMM40O96008 361 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 YPEL3P61236 119 aaPredicted RBP12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 LYZP61626 148 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 PSMG3-AS1Q96PY0 264 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 MRPL27Q9P0M9 148 aaKnown RBP12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 A6NDX4 124 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 GNG7O60262 68 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 TGFAP01135 160 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 RNF212Q495C1 297 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 FBXL7Q9UJT9 491 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 PRELID1Q9Y255 219 aa12.06□□□□□ -0.48
RAB3IP-204ENST00000378815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.487e-17■■■■■ 33.5
RAB3IP-204ENST00000378815 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 G3V318 75 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 H3BUX3 64 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 IGHV4-31P0DP07 118 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 VN1R17PQ8TDU5 208 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 CRYBA1P05813 215 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 FCGR2BP31994 310 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 SLC25A39Q9BZJ4 359 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-204ENST00000378815 LOC105371267A0A1B0GV96 52 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 WI2-2373I1.2A0A1W2PRP0 233 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 FOLR2P14207 255 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 GP9P14770 177 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 SUMO1P63165 101 aaKnown RBP12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 Q56UQ5 140 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 C19orf54Q5BKX5 351 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 ZNF343Q6P1L6 599 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 KRTAP1-3Q8IUG1 177 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 ZNF491Q8N8L2 437 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 TXN2Q99757 166 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 CENPEQ02224 2701 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 CLDN34H7C241 214 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 CRYBB3P26998 211 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 LY6EQ16553 131 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 PRSS57Q6UWY2 283 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 RNF125Q96EQ8 232 aa12.04□□□□□ -0.48
RAB3IP-204ENST00000378815 CELSR1Q9NYQ6 3014 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 RAB5AP20339 215 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 ELOBQ15370 118 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 LEMD1Q68G75 181 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 RPL35P42766 123 aaKnown RBP12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 RHOGP84095 191 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 C15orf32Q32M92 178 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 C2CD4CQ8TF44 421 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 ELOVL1Q9BW60 279 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
RAB3IP-204ENST00000378815 C9JCJ5 164 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 M0QZK8 103 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 IL4P05112 153 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 CTSGP08311 255 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 MYCNOSP40205 109 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 Q8WTZ3 238 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 Q96MF0 132 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 SHANK2-AS3Q9BTD1 123 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 TMEM14CQ9P0S9 112 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 URGCP-MRPS24S4R325 110 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 MAP1AP78559 2803 aaPredicted RBP12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 TENM4Q6N022 2769 aa12.02□□□□□ -0.49
RAB3IP-204ENST00000378815 TRAV41A0A0B4J266 112 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 PGPEP1LA6NFU8 196 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 ZNF329Q86UD4 541 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 NECAP1Q8NC96 275 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 ABCA12Q86UK0 2595 aa12.01□□□□□ -0.49
RAB3IP-204ENST00000378815 MDFIC2A0A1B0GVS7 189 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms