RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 FABP1P07148 127 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 SMUG1Q53HV7 270 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 FXYD5Q96DB9 178 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 FANCD2OSQ96PS1 177 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 CSMD2Q7Z408 3487 aa11.65□□□□□ -0.54
RAB3IP-203ENST00000378809 ZFHX3Q15911 3703 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 SH2D7A6NKC9 451 aaPredicted RBP11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 OR2J3O76001 311 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 MSMBP08118 114 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 GNG4P50150 75 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 Q56UQ5 140 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 SFRP2Q96HF1 295 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 THYN1Q9P016 225 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 A0A1W2PPQ1 181 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 CENPWQ5EE01 88 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 C7orf69Q9H7B7 122 aa11.64□□□□□ -0.55
RAB3IP-203ENST00000378809 A0A0U1RQK1 487 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 C9JCJ5 164 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 IGHV3-23P01764 117 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 EGR2P11161 476 aaPredicted RBP11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 AKR1D1P51857 326 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 MFAP4P55083 255 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 PLP1P60201 277 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
RAB3IP-203ENST00000378809 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 PPP1R2P9O14990 202 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 DSCR9P59020 149 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 KCNIP4Q6PIL6 250 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 H3BTX0 84 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 K7EN84 100 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 NDUFB8O95169 186 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 TRGC2P03986 189 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 IL4P05112 153 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 CD99P14209 185 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 HIF1ANQ9NWT6 349 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 C21orf62Q9NYP8 219 aa11.62□□□□□ -0.55
RAB3IP-203ENST00000378809 EPG5Q9HCE0 2579 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 B4DSR2 109 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 SRP14P37108 136 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 TEX38Q6PEX7 206 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 ZNF329Q86UD4 541 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 SGMS2Q8NHU3 365 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
RAB3IP-203ENST00000378809 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 PPP5D1E7EU14 171 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 TOMM40O96008 361 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 GP9P14770 177 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 COL8A1P27658 744 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 FAM3BP58499 235 aaPredicted RBP11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 RNF125Q96EQ8 232 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 ABCA2Q9BZC7 2435 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 ABCA1O95477 2261 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 OR2T8A6NH00 312 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 CNN1P51911 297 aaKnown RBP11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 OR5I1Q13606 314 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 FAM208BQ5VWN6 2430 aa11.6□□□□□ -0.55
RAB3IP-203ENST00000378809 UBR5O95071 2799 aaPredicted RBP11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 PGPA6NDG6 321 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 PEX7O00628 323 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 MGST1P10620 155 aaKnown RBP11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 SLC25A16P16260 332 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 GNG5P63218 68 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 MOB4Q9Y3A3 225 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 SOX21Q9Y651 276 aaPredicted RBP11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 LINC01548A6NM66 108 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 G3V318 75 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 SCGB2A1O75556 95 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 C9orf152Q5JTZ5 239 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 NHLRC2Q8NBF2 726 aa11.59□□□□□ -0.55
RAB3IP-203ENST00000378809 CELSR1Q9NYQ6 3014 aa11.58□□□□□ -0.56
RAB3IP-203ENST00000378809 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
RAB3IP-203ENST00000378809 TRAV34A0A0B4J273 112 aa11.58□□□□□ -0.56
RAB3IP-203ENST00000378809 C5orf52A6NGY3 159 aa11.58□□□□□ -0.56
RAB3IP-203ENST00000378809 F8W735 103 aaPredicted RBP11.58□□□□□ -0.56
RAB3IP-203ENST00000378809 TGOLN2O43493 480 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms