RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SP5Q6BEB4 398 aaPredicted RBP6.52□□□□□ -1.36
CKAP2-203ENST00000378037 ATOH7Q8N100 152 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 ZNF114Q8NC26 417 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 NUP37Q8NFH4 326 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 PFDN5Q99471 154 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 FNDC4Q9H6D8 234 aaPredicted RBP6.52□□□□□ -1.36
CKAP2-203ENST00000378037 XKRY2A2RUG3 117 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 PMS2P5A8MQ11 134 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 GGCTO75223 188 aaKnown RBP6.52□□□□□ -1.37
CKAP2-203ENST00000378037 TRGV3P03979 118 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 PSG1P11464 419 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 SSX8Q7RTT4 187 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF439Q8NDP4 499 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 OR5R1Q8NH85 324 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
CKAP2-203ENST00000378037 PIMREGQ9BSJ6 248 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 LINC01548A6NM66 108 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 FGF16O43320 207 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 FAM106CPP0CH98 169 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 FXYD7P58549 80 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.37
CKAP2-203ENST00000378037 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM155Q4W5P6 130 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM14EPQ6UXP3 125 aa6.52□□□□□ -1.37
CKAP2-203ENST00000378037 OSR1Q8TAX0 266 aaPredicted RBP6.52□□□□□ -1.37
CKAP2-203ENST00000378037 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 NBR2O15453 112 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 GOSR1O95249 250 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 CXorf1O96002 111 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 PRSS8Q16651 343 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 KHDC3LQ587J8 217 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 OR2T10Q8NGZ9 312 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 ITLN2Q8WWU7 325 aaPredicted RBP6.51□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
CKAP2-203ENST00000378037 SIGLEC9Q9Y336 463 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
CKAP2-203ENST00000378037 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 SFTPCP11686 197 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 RHOGP84095 191 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 PGLYRP4Q96LB8 373 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 NAT8Q9UHE5 227 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 UFC1Q9Y3C8 167 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 AGRNO00468 2067 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 LHBP01229 141 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 C15orf32Q32M92 178 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 CYP2G1PQ6ZSU1 146 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 TCF24Q7RTU0 167 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 OCC1Q8TAD7 63 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 OR51M1Q9H341 326 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 HIGD1AQ9Y241 93 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 WDR83OSQ9Y284 106 aa6.51□□□□□ -1.37
CKAP2-203ENST00000378037 NBEAP1P0C6P0 100 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 C8orf88P0DMB2 117 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 EFNA4P52798 201 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 BLCAPP62952 87 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 PRCDQ00LT1 54 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 MEF2CQ06413 473 aaPredicted RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 CD69Q07108 199 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 ODF3L1Q8IXM7 274 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 ZNF295-AS1Q8N0V1 137 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 MCRIP2Q9BUT9 160 aaKnown RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 IGKV1OR2-108A0A075B7D4 117 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 A6NNC1 897 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 NPIPB11E5RHQ5 1161 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 M0QZ24 198 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 IGHV4-39P01824 125 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 HLA-DMBP28068 263 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 DYNAPQ8N1N2 210 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 KCNIP2Q9NS61 270 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 TMEM8BA6NDV4 472 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 VENTXO95231 258 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 RNASE2P10153 161 aaKnown RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 HIST1H1BP16401 226 aaKnown RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 RAB4AP20338 218 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 CSN1S1P47710 185 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 RELQ04864 619 aaPredicted RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 CYB5R2Q6BCY4 276 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
CKAP2-203ENST00000378037 Q8NFD4 153 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 TOLLIPQ9H0E2 274 aa6.5□□□□□ -1.37
CKAP2-203ENST00000378037 CHEK1O14757 476 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 KRTAP10-9P60411 292 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
CKAP2-203ENST00000378037 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 BTF3L4Q96K17 158 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 PMCHL2Q9BQD1 86 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 AAMDCQ9H7C9 122 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 C21orf62Q9NYP8 219 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
CKAP2-203ENST00000378037 TRBV6-6A0A0A6YYG2 114 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms