RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 SNHG12Q9BXW3 62 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 PGPA6NDG6 321 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 EREGO14944 169 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 TOMM40O96008 361 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 RAB4AP20338 218 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 GNG5P63218 68 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 SLAQ13239 276 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 ATG101Q9BSB4 218 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 ROS1P08922 2347 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 PPIAL4CA0A0B4J2A2 164 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 I3L2K1 104 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 OR2J3O76001 311 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 SLC25A5P05141 298 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 IGLC1P0CG04 106 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 PPIAL4GP0DN37 164 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 CA7P43166 264 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 DLX1P56177 255 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 MUC15Q8N387 334 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 C5orf17Q8NAS9 161 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 LY6G5BQ8NDX9 201 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 CBLN4Q9NTU7 201 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 TBL2Q9Y4P3 447 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-201ENST00000377507 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 VWC2LB2RUY7 222 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 LYNX1G3V0Z9 82 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 M0R143 59 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 HAX1O00165 279 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF324O75467 553 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 LTAP01374 205 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 RNF224P0DH78 156 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 LYNX1P0DP58 116 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 UBE2G1P62253 170 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 CT83Q5H943 113 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 ASPHD1Q5U4P2 390 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 C18orf32Q8TCD1 76 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 RBM14Q96PK6 669 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 NEU1Q99519 415 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 CEP250Q9BV73 2442 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 ANKRD11Q6UB99 2663 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 C19orf71A6NCJ1 209 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 HIGD1CA8MV81 97 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 SIAH2O43255 324 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 TCRAP04437 139 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 RIF1Q5UIP0 2472 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 NIT1Q86X76 327 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 BLNKQ8WV28 456 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 SRSF12Q8WXF0 261 aaKnown RBP9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 RPEQ96AT9 228 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
TNFRSF9-201ENST00000377507 PSG1P11464 419 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 AMTP48728 403 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 Q9H3A6 140 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 ACACAQ13085 2346 aa9.34□□□□□ -0.91
TNFRSF9-201ENST00000377507 PLXNB1O43157 2135 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 APELAP0DMC3 54 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 PRB3Q04118 309 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 MMDQ15546 238 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 LDLRAD2Q5SZI1 272 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 LHFPL4Q7Z7J7 247 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 PKDREJQ9NTG1 2253 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 PCNX1Q96RV3 2341 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 ZFHX2Q9C0A1 2572 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 TRBV6-1A0A0K0K1D8 114 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 DIRC3C9JPN6 131 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 IGKV1-17P01599 117 aa9.33□□□□□ -0.92
TNFRSF9-201ENST00000377507 LIPFP07098 398 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms