RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FAM209BQ5JX69 171 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 IGFL3Q6UXB1 125 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 RNF5Q99942 180 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 KLF17Q5JT82 389 aaPredicted RBP11.16□□□□□ -0.62
C9orf47-203ENST00000375851 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 ASCL2Q99929 193 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
C9orf47-203ENST00000375851 YAE1D1Q9NRH1 226 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 C15orf62A8K5M9 175 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 SERF1AO75920 110 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
C9orf47-203ENST00000375851 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 A0A1B0GWJ7 208 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 TNFSF13O75888 250 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 IGKV1-16P04430 117 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 LYL1P12980 280 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 LMO1P25800 156 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 PAPPA-AS1Q5QFB9 102 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 Q6ZR03 302 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 REG4Q9BYZ8 158 aa11.15□□□□□ -0.62
C9orf47-203ENST00000375851 PMS2P5A8MQ11 134 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BKO60814 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BJP06899 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BOP23527 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BBP33778 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BDP58876 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BCP62807 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.63
C9orf47-203ENST00000375851 GLMPQ8WWB7 406 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.63
C9orf47-203ENST00000375851 F11RQ9Y624 299 aaKnown RBP11.15□□□□□ -0.63
C9orf47-203ENST00000375851 TCF21O43680 179 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
C9orf47-203ENST00000375851 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 PLCE1Q9P212 2302 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 PPP1R17O96001 155 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 CA1P00915 261 aaPredicted RBP11.14□□□□□ -0.63
C9orf47-203ENST00000375851 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 A0A1W2PRX2 142 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 PAX8Q06710 450 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 H3BVH4 76 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 MOB4Q9Y3A3 225 aa11.14□□□□□ -0.63
C9orf47-203ENST00000375851 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 LOC105371267A0A1B0GV96 52 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 H7C1H1 209 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 TRBV24-1A0A075B6N3 115 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 A0A1B0GW64 132 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 H7C2G1 150 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
C9orf47-203ENST00000375851 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
C9orf47-203ENST00000375851 COLCA2A8K830 154 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 M0R1W7 72 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 ADMP35318 185 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 DUX3Q96PT4 197 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 SCRT1Q9BWW7 348 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
C9orf47-203ENST00000375851 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
C9orf47-203ENST00000375851 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 DERL1Q9BUN8 251 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 LOC102724200A0A096LPH7 203 aaPredicted RBP11.12□□□□□ -0.63
C9orf47-203ENST00000375851 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 TRGV9Q99603 122 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
C9orf47-203ENST00000375851 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
C9orf47-203ENST00000375851 MLANAQ16655 118 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 WDR86Q86TI4 376 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
C9orf47-203ENST00000375851 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms