RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 MIR17HGQ75NE6 70 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 VPS25Q9BRG1 176 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 GSX1Q9H4S2 264 aaPredicted RBP11.24□□□□□ -0.61
MSH5-202ENST00000375740 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 A0A1W2PN81 502 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
MSH5-202ENST00000375740 SRIP30626 198 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 VMA21Q3ZAQ7 101 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 OR4F17Q8NGA8 305 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 V9GYV3 84 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 LY6HO94772 140 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 FXYD3Q14802 87 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 VAMP3Q15836 100 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 TSKUQ8WUA8 353 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 TXNDC17Q9BRA2 123 aa11.23□□□□□ -0.61
MSH5-202ENST00000375740 PPIAL4CA0A0B4J2A2 164 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 PPIAL4GP0DN37 164 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 FSTL3O95633 263 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 IGLL1P15814 213 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 LGALS7P47929 136 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 RPEL1Q2QD12 228 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 TMEM136Q6ZRR5 245 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
MSH5-202ENST00000375740 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
MSH5-202ENST00000375740 MALRD1Q5VYJ5 2156 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 BMPR1BO00238 502 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 PPBPP02775 128 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 PSG1P11464 419 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 MRPL54Q6P161 138 aaKnown RBP11.22□□□□□ -0.61
MSH5-202ENST00000375740 EAF1Q96JC9 268 aaPredicted RBP11.22□□□□□ -0.61
MSH5-202ENST00000375740 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
MSH5-202ENST00000375740 SPTA1P02549 2419 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 KLHDC1Q8N7A1 406 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 CST9LQ9H4G1 147 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.61
MSH5-202ENST00000375740 MT-CO2P00403 227 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 IGHV3-48P01763 117 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 COX7A1P24310 79 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 CNTFRP26992 372 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 Q56UQ5 140 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 ZC2HC1AQ96GY0 325 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 RAB1BQ9H0U4 201 aa11.21□□□□□ -0.62
MSH5-202ENST00000375740 FNDC4Q9H6D8 234 aaPredicted RBP11.21□□□□□ -0.62
MSH5-202ENST00000375740 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 REG1AP05451 166 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.622e-7■■□□□ 14.2
MSH5-202ENST00000375740 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
MSH5-202ENST00000375740 PSG5Q15238 335 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 OCIAD2Q56VL3 154 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 TEX45Q8NA69 505 aa11.2□□□□□ -0.62
MSH5-202ENST00000375740 TECRQ9NZ01 308 aaKnown RBP11.2□□□□□ -0.62
MSH5-202ENST00000375740 LY6DQ14210 128 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 NUDT10Q8NFP7 164 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 C8orf46Q8TAG6 207 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 ZNF503Q96F45 646 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 PLXNB1O43157 2135 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 ABCA4P78363 2273 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
MSH5-202ENST00000375740 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 OR2T8A6NH00 312 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 CA1P00915 261 aaPredicted RBP11.19□□□□□ -0.62
MSH5-202ENST00000375740 CRYGBP07316 175 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 CX3CL1P78423 397 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 PNKDQ8N490 385 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 BORCS7Q96B45 105 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 LRBAP50851 2863 aa11.19□□□□□ -0.62
MSH5-202ENST00000375740 ATRXP46100 2492 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 RELNP78509 3460 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 TNXAQ16473 311 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 MRPL36Q9P0J6 103 aaKnown RBP11.18□□□□□ -0.62
MSH5-202ENST00000375740 ONECUT1Q9UBC0 465 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 RBP4P02753 201 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 SLAQ13239 276 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 HCP5Q6MZN7 132 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms