RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 C20orf144Q9BQM9 153 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 DPM3Q9P2X0 92 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 ARHGAP21Q5T5U3 1957 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 KIF26AQ9ULI4 1882 aaPredicted RBP13.79□□□□□ -0.2
VARS-215ENST00000375663 A0A1B0GW15 77 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 LINC00479Q96M42 142 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 FAM181BA6NEQ2 426 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 B9A039 149 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 ERVK11-1P61568 191 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 TM4SF20Q53R12 229 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 NUP35Q8NFH5 326 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 OBSL1O75147 1896 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 CDKN1AP38936 164 aa13.79□□□□□ -0.2
VARS-215ENST00000375663 Q0VG73 95 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 ST20Q9HBF5 79 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 RNFT1Q5M7Z0 435 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 MALRD1Q5VYJ5 2156 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 TRAV8-6A0A0B4J262 113 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 RASL11AQ6T310 242 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 CHCHD1Q96BP2 118 aaKnown RBP13.78□□□□□ -0.2
VARS-215ENST00000375663 C21orf62Q9NYP8 219 aa13.78□□□□□ -0.2
VARS-215ENST00000375663 LOC107984156A0A0G2JMH3 177 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 IGHV3-23P01764 117 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 IGKV1-16P04430 117 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 APOBEC3AP31941 199 aaPredicted RBP13.77□□□□□ -0.2
VARS-215ENST00000375663 DLX1P56177 255 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 ARL17AQ8IVW1 177 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 TMEM133Q9H2Q1 129 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 TMEM160Q9NX00 188 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 DCAF16Q9NXF7 216 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 SLC25A15Q9Y619 301 aa13.77□□□□□ -0.2
VARS-215ENST00000375663 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 CD59P13987 128 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 Q6ZSR3 168 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 PSG8Q9UQ74 426 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 PIEZO1Q92508 2521 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 YPEL3P61236 119 aaPredicted RBP13.77□□□□□ -0.21
VARS-215ENST00000375663 UBTD1Q9HAC8 227 aa13.77□□□□□ -0.21
VARS-215ENST00000375663 MRPL27Q9P0M9 148 aaKnown RBP13.77□□□□□ -0.21
VARS-215ENST00000375663 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 LOC105371242A0A075B767 164 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 PRB4P10163 310 aaPredicted RBP13.76□□□□□ -0.21
VARS-215ENST00000375663 LDLRAD2Q5SZI1 272 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 FER1L6-AS1Q8NA97 138 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 OR10J6PQ8NGY7 276 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 A6NJY4 79 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
VARS-215ENST00000375663 RPL13AP40429 203 aaKnown RBP13.76□□□□□ -0.21
VARS-215ENST00000375663 LOXL3P58215 753 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 Q6ZWC4 215 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
VARS-215ENST00000375663 A0A1W2PS18 150 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 VDAC2P45880 294 aaPredicted RBP13.76□□□□□ -0.21
VARS-215ENST00000375663 RAB9AP51151 201 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 FAM57AQ8TBR7 257 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 RNF125Q96EQ8 232 aa13.76□□□□□ -0.21
VARS-215ENST00000375663 KIAA1549LQ6ZVL6 1849 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 H3BVH4 76 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 TSPOP30536 169 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 C8orf46Q8TAG6 207 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 PHLDA3Q9Y5J5 127 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 IGHV3-49A0A0A0MS15 119 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 H3BUT2 72 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 LINC01560Q8TB33 94 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 TMEM167AQ8TBQ9 72 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 DKK1O94907 266 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 DTX1Q86Y01 620 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 SMIM12Q96EX1 92 aa13.75□□□□□ -0.21
VARS-215ENST00000375663 FGF23Q9GZV9 251 aaPredicted RBP13.75□□□□□ -0.21
VARS-215ENST00000375663 M0R3E3 92 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 PRR14LQ5THK1 2151 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 FNDC10F2Z333 226 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 HTN1P15515 57 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 TCRAP04437 139 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 EXOC3-AS1Q8N2X6 119 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 OR1N2Q8NGR9 330 aa13.74□□□□□ -0.21
VARS-215ENST00000375663 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 HIST1H1AQ02539 215 aaPredicted RBP13.73□□□□□ -0.21
VARS-215ENST00000375663 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 OR5AN1Q8NGI8 311 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 OR11H2Q8NH07 326 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 SPCS1Q9Y6A9 102 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 NPPCP23582 126 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 MPV17L2Q567V2 206 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 SCRT1Q9BWW7 348 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 hDV102S1A0JD36 115 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 PSG1P11464 419 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 CACNG7P62955 275 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 Q6ZR03 302 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 FOXC2Q99958 501 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 PYGO2Q9BRQ0 406 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 TRAV8-1A0A0A6YYK1 113 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 COA6Q5JTJ3 125 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 598.7 ms