RNA–Protein interactions for RNA: ENST00000374720.7

SLC44A1-201, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC44A1, Length 10,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-201ENST00000374720 UPK2O00526 184 aa9.68□□□□□ -0.86
SLC44A1-201ENST00000374720 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
SLC44A1-201ENST00000374720 ZNF114Q8NC26 417 aa9.68□□□□□ -0.86
SLC44A1-201ENST00000374720 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
SLC44A1-201ENST00000374720 C18orf12Q96KH6 178 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 D6R8Y8 96 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 CTSBP07858 339 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 SIGLEC12Q96PQ1 595 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 OVOL1O14753 267 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 BCL6BQ8N143 479 aaPredicted RBP9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 RPL15P61313 204 aaKnown RBP9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 LSM4Q9Y4Z0 139 aaKnown RBP9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 SPSB2Q99619 263 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 GP6Q9HCN6 339 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 NYNRINQ9P2P1 1898 aaKnown RBP9.67□□□□□ -0.86
SLC44A1-201ENST00000374720 TSKUQ8WUA8 353 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 FAM90A1Q86YD7 464 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 MAJINQ3KP22 176 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 C4orf51C9J302 202 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 PPP1R32Q7Z5V6 425 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 SP9P0CG40 484 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 PRR31Q5SQ13 230 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 TRPM7Q96QT4 1865 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 SCRT1Q9BWW7 348 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 A0A087X0K7 114 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 SRSF7Q16629 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
SLC44A1-201ENST00000374720 C17orf100A8MU93 164 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 SPINK8P0C7L1 97 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 GUSBP1Q15486 140 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 IGHV1-2P23083 117 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 EFNB3Q15768 340 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 LINC01590Q5TEZ4 76 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 C1orf159Q96HA4 380 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 LOC105371267A0A1B0GV96 52 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 SRSF3P84103 164 aaKnown RBP9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 RPL36AP83881 106 aaKnown RBP9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 RPL36ALQ969Q0 106 aaKnown RBP9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 PSG7Q13046 419 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
SLC44A1-201ENST00000374720 A0A0G2JMM0 328 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 A0A1W2PPB8 328 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 KIR3DP1A8MWS1 328 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 TIAF1O95411 115 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 WNT2P09544 360 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 C9orf153Q5TBE3 101 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 C1QTNF5Q9BXJ0 243 aa9.65□□□□□ -0.87
SLC44A1-201ENST00000374720 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 ACTL10Q5JWF8 245 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 CNOT1A5YKK6 2376 aaKnown RBP9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 CD5LO43866 347 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 EXOC3-AS1Q8N2X6 119 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 SRRM4A7MD48 611 aaKnown RBP9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 MORN2Q502X0 79 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 YPEL1O60688 119 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 ZNF497Q6ZNH5 498 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 LCNL1Q6ZST4 164 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 LINC00527Q9UJ94 153 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 CHCHD2Q9Y6H1 151 aaPredicted RBP9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 RALGAPA2Q2PPJ7 1873 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 SS18Q15532 418 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 TMEM219Q86XT9 240 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 CSTL1Q9H114 145 aa9.64□□□□□ -0.87
SLC44A1-201ENST00000374720 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 TFF1P04155 84 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 TMEM126AQ9H061 195 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 TNFRSF14Q92956 283 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 TIMM21Q9BVV7 248 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 HIST1H2BLQ99880 126 aa9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 RSPO3Q9BXY4 272 aaPredicted RBP9.63□□□□□ -0.87
SLC44A1-201ENST00000374720 TIMM23O14925 209 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms