RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.5
COL9A2-202ENST00000372748 TAX1BP3O14907 124 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
COL9A2-202ENST00000372748 PSG1P11464 419 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 OR1L8Q8NGR8 309 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 C7orf69Q9H7B7 122 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 A0A1B0GXF2 115 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 LEPROTL1O95214 131 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 HBBP68871 147 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
COL9A2-202ENST00000372748 DLL1O00548 723 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 ORM2P19652 201 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 C22orf34Q6ZV56 151 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 ZC2HC1AQ96GY0 325 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 TRAV30A0A087WSZ9 112 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
COL9A2-202ENST00000372748 PGPA6NDG6 321 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 BVES-AS1Q5T3Y7 98 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 PRSS33Q8NF86 280 aa11.94□□□□□ -0.5
COL9A2-202ENST00000372748 MOSP00540 346 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
COL9A2-202ENST00000372748 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
COL9A2-202ENST00000372748 RBMXL3Q8N7X1 1067 aaKnown RBP11.93□□□□□ -0.5
COL9A2-202ENST00000372748 ZNF714Q96N38 554 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
COL9A2-202ENST00000372748 WT1-ASQ06250 92 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 RUSC1-AS1Q66K80 236 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 AMMECR1LQ6DCA0 310 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 SLC25A34Q6PIV7 304 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 ST20Q9HBF5 79 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 SNAI2O43623 268 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 LHBP01229 141 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 CSN3P07498 182 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 PDPNQ86YL7 162 aa11.93□□□□□ -0.5
COL9A2-202ENST00000372748 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 DYSFO75923 2080 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 A0A087X0K7 114 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 CFHR2P36980 270 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 ATP5L2Q7Z4Y8 100 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 PIP4P1Q86T03 277 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 CACNG8Q8WXS5 425 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 RPP21Q9H633 154 aaKnown RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 ZNF430Q9H8G1 570 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 IGKV1D-37A0A075B6S9 117 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 MBD3L4A6NDZ8 208 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 MBD3L3A6NE82 208 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 MBD3L5A6NJ08 208 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 SLC25A48Q6ZT89 311 aaKnown RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 OR1B1Q8NGR6 318 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 MBD3L2Q8NHZ7 208 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-202ENST00000372748 CHRDL1Q9BU40 450 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 CST9LQ9H4G1 147 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
COL9A2-202ENST00000372748 TOX4O94842 621 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 FSTL3O95633 263 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 APELAP0DMC3 54 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 GLRXP35754 106 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 ATMQ13315 3056 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 FOXE3Q13461 319 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
COL9A2-202ENST00000372748 ZADH2Q8N4Q0 377 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 OR1L4Q8NGR5 311 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 GPR82Q96P67 336 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 IGHV3-21A0A0B4J1V1 117 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 TCRBV4S1A1TA0A5B7 111 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 P01737 135 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 PCNX1Q96RV3 2341 aa11.91□□□□□ -0.5
COL9A2-202ENST00000372748 MYCNOSP40205 109 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 TNFAIP6P98066 277 aaPredicted RBP11.9□□□□□ -0.5
COL9A2-202ENST00000372748 DIAPH2-AS1Q14236 149 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.5
COL9A2-202ENST00000372748 RAI1Q7Z5J4 1906 aaPredicted RBP11.9□□□□□ -0.5
COL9A2-202ENST00000372748 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 S100A7P31151 101 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 RHOGP84095 191 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 DEFB125Q8N687 156 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 GAFA1Q96PS6 74 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 RAB9BQ9NP90 201 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 ACACAQ13085 2346 aa11.9□□□□□ -0.5
COL9A2-202ENST00000372748 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
COL9A2-202ENST00000372748 A8MWL6 223 aa11.89□□□□□ -0.51
COL9A2-202ENST00000372748 OCIAD2Q56VL3 154 aa11.89□□□□□ -0.51
COL9A2-202ENST00000372748 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
COL9A2-202ENST00000372748 RNF7Q9UBF6 113 aa11.89□□□□□ -0.51
COL9A2-202ENST00000372748 PIEZO2Q9H5I5 2752 aa11.89□□□□□ -0.51
COL9A2-202ENST00000372748 CHEK1O14757 476 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms