RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SRSF12Q8WXF0 261 aaKnown RBP12.65□□□□□ -0.38
C9orf78-201ENST00000372447 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
C9orf78-201ENST00000372447 TECRQ9NZ01 308 aaKnown RBP12.65□□□□□ -0.38
C9orf78-201ENST00000372447 TCRBV4S1A1TA0A5B7 111 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 CRYGCP07315 174 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 ADIRFQ15847 76 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 PRIMA1Q86XR5 153 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 NPBQ8NG41 125 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 JMJD8Q96S16 334 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 MRPL36Q9P0J6 103 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 IGKV1D-37A0A075B6S9 117 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 C1orf196B1AJZ1 125 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 CLDN34H7C241 214 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 CORTO00230 105 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 NDUFA3O95167 84 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 FAM106CPP0CH98 169 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 RND2P52198 227 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 ELOBQ15370 118 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 SRSF8Q9BRL6 282 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
C9orf78-201ENST00000372447 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 F11RQ9Y624 299 aaKnown RBP12.64□□□□□ -0.39
C9orf78-201ENST00000372447 PSMB11A5LHX3 300 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 A6NDX4 124 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 TAS2R45P59539 299 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 RAB5BP61020 215 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 SELENOTP62341 195 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 ZNF90Q03938 601 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 EBI3Q14213 229 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 ZNF343Q6P1L6 599 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 C19orf35Q6ZS72 473 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 ZFP82Q8N141 532 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 RNF2Q99496 336 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 MRPL32Q9BYC8 188 aaKnown RBP12.63□□□□□ -0.39
C9orf78-201ENST00000372447 DNAJC4Q9NNZ3 241 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 TMEM167BQ9NRX6 74 aa12.63□□□□□ -0.39
C9orf78-201ENST00000372447 NDUFB4O95168 129 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 CNIH1O95406 144 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 HES1Q14469 280 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 OR2T10Q8NGZ9 312 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 Q8WTZ3 238 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 ARL2-SNX15V9GYD0 113 aa12.62□□□□□ -0.39
C9orf78-201ENST00000372447 C8orf88P0DMB2 117 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 TMEM116Q8NCL8 245 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 OR1L4Q8NGR5 311 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 PFDN5Q99471 154 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 DOK5Q9P104 306 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 PITPNC1Q9UKF7 332 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 OR7C2O60412 319 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 RNASE1P07998 156 aaKnown RBP12.61□□□□□ -0.39
C9orf78-201ENST00000372447 CTRB1P17538 263 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 DMRT1Q9Y5R6 373 aa12.61□□□□□ -0.39
C9orf78-201ENST00000372447 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 COX7A2P2O60397 106 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 CXCL1P09341 107 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 TMEM11P17152 192 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 C5orf64Q2M2E5 130 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 SMUG1Q53HV7 270 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 Q8N6K4 173 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 TRGV9Q99603 122 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 DERL1Q9BUN8 251 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 C2CD3Q4AC94 2353 aa12.6□□□□□ -0.39
C9orf78-201ENST00000372447 TGIF2-C20orf24A0A0A6YYL0 155 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 FAM181BA6NEQ2 426 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 TSPAN9O75954 239 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 FXYD3Q14802 87 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 RBM14Q96PK6 669 aaKnown RBP12.59□□□□□ -0.39
C9orf78-201ENST00000372447 UHRF2Q96PU4 802 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 WNT10AQ9GZT5 417 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 SAV1Q9H4B6 383 aaPredicted RBP12.59□□□□□ -0.39
C9orf78-201ENST00000372447 BIN3Q9NQY0 253 aa12.59□□□□□ -0.39
C9orf78-201ENST00000372447 PLXNB1O43157 2135 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 MORN5Q5VZ52 161 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 PATE2Q6UY27 113 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 LINC01551Q86U37 167 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 C1QL4Q86Z23 238 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 FAM167A-AS1Q96KT0 104 aa12.58□□□□□ -0.39
C9orf78-201ENST00000372447 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
C9orf78-201ENST00000372447 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
C9orf78-201ENST00000372447 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms