RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 IGLV3-32A0A0A0MS00 114 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 RNASE6Q93091 150 aaKnown RBP19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 PEMTQ9UBM1 199 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 FBLN5Q9UBX5 448 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 CD28P10747 220 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 ANK1P16157 1881 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 SPAG8Q99932 426 aaPredicted RBP19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 GGTLC1Q9BX51 225 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 TP53BP1Q12888 1972 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 ZNF815PA8K554 130 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 NDPQ00604 133 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 SIGLEC15Q6ZMC9 328 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 VMO1Q7Z5L0 202 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 REG4Q9BYZ8 158 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 MBD3L1Q8WWY6 194 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 hDV102S1A0JD36 115 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 RBMY1BA6NDE4 496 aaKnown RBP19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 RBMY1EA6NEQ0 496 aaKnown RBP19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 RBMY1DP0C7P1 496 aaKnown RBP19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 RBMY1A1P0DJD3 496 aaKnown RBP19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 RBMY1CP0DJD4 496 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 PSMG4Q5JS54 123 aa19.73■□□□□ 0.75
RAPGEF1-203ENST00000372195 A0A1W2PRE2 83 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 CKS1BP61024 79 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 Q0VFX4 171 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 TSKUQ8WUA8 353 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 ARHGEF17Q96PE2 2063 aaPredicted RBP19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 TRAV21A0A0B4J279 112 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 KLF17Q5JT82 389 aaPredicted RBP19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 ANAPC13Q9BS18 74 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 WDR83OSQ9Y284 106 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 IGHV2-26A0A0B4J1V2 119 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 SLC50A1Q9BRV3 221 aa19.72■□□□□ 0.75
RAPGEF1-203ENST00000372195 MPZP25189 248 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 TMEM256Q8N2U0 113 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 ZFP36L1Q07352 338 aaKnown RBP19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 RPUSD1Q9UJJ7 312 aaKnown RBP19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 STAG3L3P0CL85 134 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 MCRIP2Q9BUT9 160 aaKnown RBP19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 SCN5AQ14524 2016 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 D6R8Y8 96 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 SAMD5Q5TGI4 173 aa19.71■□□□□ 0.75
RAPGEF1-203ENST00000372195 TRAV8-4A0A0B4J246 113 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 ALPK2Q86TB3 2170 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 NDUFS6O75380 124 aaKnown RBP19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 PAX8Q06710 450 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF124Q15973 351 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 PNRC2Q9NPJ4 139 aaKnown RBP19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 IGKV1-5P01602 117 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 TCRAP04437 139 aa19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 SRSF6Q13247 344 aaKnown RBP19.7■□□□□ 0.74
RAPGEF1-203ENST00000372195 MBNL3Q9NUK0 354 aaKnown RBP19.69■□□□□ 0.74
RAPGEF1-203ENST00000372195 PSG1P11464 419 aa19.69■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF474Q6S9Z5 364 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 LCN12Q6JVE5 192 aa19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 CYSLTR1Q9Y271 337 aa19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 LHFPL1Q86WI0 220 aa19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 SLC25A39Q9BZJ4 359 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 Q8TAT8 98 aa19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 IFI27L1Q96BM0 104 aa19.68■□□□□ 0.74
RAPGEF1-203ENST00000372195 TRGV4A0A0C4DH28 118 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 LYZL1Q6UWQ5 148 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 SIGMAR1Q99720 223 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 A0A087X0K7 114 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 LINC00473A8K010 186 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 SRSF4Q08170 494 aaKnown RBP19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 RNF182Q8N6D2 247 aa19.67■□□□□ 0.74
RAPGEF1-203ENST00000372195 C15orf32Q32M92 178 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 CHCHD1Q96BP2 118 aaKnown RBP19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 TNFSF13O75888 250 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF138P52744 262 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 AGMATQ9BSE5 352 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 MLANAQ16655 118 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF672Q499Z4 452 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF479Q96JC4 524 aa19.66■□□□□ 0.74
RAPGEF1-203ENST00000372195 ZNF415Q09FC8 603 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 TMEM155Q4W5P6 130 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 RPP25LQ8N5L8 163 aaKnown RBP19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 PRSS22Q9GZN4 317 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 IGHV1-3A0A0C4DH29 117 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 IL18BPO95998 194 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 MPDZO75970 2070 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 BRD3OSQ6XYD6 125 aa19.65■□□□□ 0.74
RAPGEF1-203ENST00000372195 SMKR1H3BMG3 65 aa19.64■□□□□ 0.74
RAPGEF1-203ENST00000372195 NTF4P34130 210 aa19.64■□□□□ 0.74
RAPGEF1-203ENST00000372195 NXT2Q9NPJ8 142 aaKnown RBP19.64■□□□□ 0.74
RAPGEF1-203ENST00000372195 IGHV1-8P0DP01 117 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 C1orf122Q6ZSJ8 110 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 GBF1Q92538 1859 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 PRTN3P24158 256 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 ACTL10Q5JWF8 245 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 SPACA3Q8IXA5 215 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 TRAV41A0A0B4J266 112 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 LAGE3Q14657 143 aa19.64■□□□□ 0.73
RAPGEF1-203ENST00000372195 TMEM8BA6NDV4 472 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 CD59P13987 128 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 IGHV3-53P01767 116 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 LINC01551Q86U37 167 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 CRIPAKQ8N1N5 446 aa19.63■□□□□ 0.73
RAPGEF1-203ENST00000372195 ZNRD1Q9P1U0 126 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms