RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 C19orf24Q9BVV8 132 aa11.08□□□□□ -0.64
PREX1-201ENST00000371941 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 ZGRF1Q86YA3 2104 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 C15orf62A8K5M9 175 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 NIT1Q86X76 327 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 EML6Q6ZMW3 1958 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 FMC1Q96HJ9 113 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 WNT2P09544 360 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 LEPP41159 167 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 TMEM170BQ5T4T1 132 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 SPSB3Q6PJ21 355 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.07□□□□□ -0.64
PREX1-201ENST00000371941 Q8TAT8 98 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 MBD3L1Q8WWY6 194 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
PREX1-201ENST00000371941 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
PREX1-201ENST00000371941 FABP2P12104 132 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 NBR2O15453 112 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 TYMSP04818 313 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 FOXL1Q12952 345 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 ZNF474Q6S9Z5 364 aaPredicted RBP11.06□□□□□ -0.64
PREX1-201ENST00000371941 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
PREX1-201ENST00000371941 ZNF106Q9H2Y7 1883 aaKnown RBP11.06□□□□□ -0.64
PREX1-201ENST00000371941 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
PREX1-201ENST00000371941 C7orf69Q9H7B7 122 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 GAFA1Q96PS6 74 aa11.06□□□□□ -0.64
PREX1-201ENST00000371941 IGHV2-26A0A0B4J1V2 119 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 COL8A2P25067 703 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 EMP1P54849 157 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
PREX1-201ENST00000371941 RNASE6Q93091 150 aaKnown RBP11.05□□□□□ -0.64
PREX1-201ENST00000371941 WDR87Q6ZQQ6 2873 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 SRSF4Q08170 494 aaKnown RBP11.05□□□□□ -0.64
PREX1-201ENST00000371941 BRD3OSQ6XYD6 125 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 COLCA1Q6ZS62 124 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 PSG1P11464 419 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 PLA2G5P39877 138 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 FREM1Q5H8C1 2179 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 hDV102S1A0JD36 115 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 SMKR1H3BMG3 65 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
PREX1-201ENST00000371941 A0A1W2PS18 150 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 RHOGP84095 191 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 OBSL1O75147 1896 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 DYSFO75923 2080 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
PREX1-201ENST00000371941 ALPK3Q96L96 1907 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 PAX9P55771 341 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 MEF2CQ06413 473 aaPredicted RBP11.04□□□□□ -0.64
PREX1-201ENST00000371941 FAM106AQ4KMX7 169 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 CA7P43166 264 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
PREX1-201ENST00000371941 ZNF672Q499Z4 452 aaPredicted RBP11.04□□□□□ -0.64
PREX1-201ENST00000371941 AREGP15514 252 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 UBE2L6O14933 153 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 UCNP55089 124 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 TRAV40A0A0B4J280 105 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 APOMO95445 188 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 IGKV1-39P01597 117 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 IGKV1D-39P04432 117 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 PCP4P48539 62 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 FAM168AQ92567 244 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 LYL1P12980 280 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 LGALS3P17931 250 aaKnown RBP11.03□□□□□ -0.64
PREX1-201ENST00000371941 CACNA1BQ00975 2339 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 DDB2Q92466 427 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
PREX1-201ENST00000371941 IGHV3-73A0A0B4J1V6 119 aa11.02□□□□□ -0.64
PREX1-201ENST00000371941 STAG3L2P0CL84 134 aa11.02□□□□□ -0.64
PREX1-201ENST00000371941 STAG3L3P0CL85 134 aa11.02□□□□□ -0.64
PREX1-201ENST00000371941 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 Q6ZR03 302 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 SYT8Q8NBV8 401 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 H0YJW9 148 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 SPRNQ5BIV9 151 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 LINC00614P0C842 121 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 JOSD1Q15040 202 aaPredicted RBP11.02□□□□□ -0.65
PREX1-201ENST00000371941 RRN3P1Q2M238 152 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
PREX1-201ENST00000371941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.65
PREX1-201ENST00000371941 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
PREX1-201ENST00000371941 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms