RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MUC4Q99102 2169 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 CD55P08174 381 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 C1QCP02747 245 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 LCTP09848 1927 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 LINC01551Q86U37 167 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 LINC01587Q99440 93 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 DEPPQ9NTK1 212 aa12.81□□□□□ -0.36
COL5A1-201ENST00000371817 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 PLXNA2O75051 1894 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 TM4SF5O14894 197 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 TM4SF4P48230 202 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 LAIR2Q6ISS4 152 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 LIMS2Q7Z4I7 341 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 NUP35Q8NFH5 326 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 C21orf140B9A014 251 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 PROB1E7EW31 1015 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 K7EP34 96 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
COL5A1-201ENST00000371817 UTF1Q5T230 341 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 SMIM20Q8N5G0 67 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 OR5P3Q8WZ94 311 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
COL5A1-201ENST00000371817 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
COL5A1-201ENST00000371817 TRGV3P03979 118 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 C19orf48Q6RUI8 117 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 CD160O95971 181 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-201ENST00000371817 C17orf98A8MV24 154 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 GATA2P23769 480 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-201ENST00000371817 KLF14Q8TD94 323 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-201ENST00000371817 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 OR13A1Q8NGR1 328 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 NAV3Q8IVL0 2385 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 IGHV3-23P01764 117 aa12.79□□□□□ -0.36
COL5A1-201ENST00000371817 A0A1W2PPM0 123 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 SP9P0CG40 484 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 A0A0J9YW62 118 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 A0A0G2JK05 382 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-201ENST00000371817 TEX43Q6ZNM6 134 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 RLFQ13129 1914 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 LINC01590Q5TEZ4 76 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 NPIPB5A8MRT5 1133 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 F8WEM9 126 aa12.78□□□□□ -0.36
COL5A1-201ENST00000371817 WISP3O95389 354 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-201ENST00000371817 CELA2BP08218 269 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-201ENST00000371817 ITLN2Q8WWU7 325 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-201ENST00000371817 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 SHISA3A0PJX4 238 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 C15orf61A6NNL5 157 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 ZC2HC1BQ5TFG8 222 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 ANKRD29Q8N6D5 301 aa12.77□□□□□ -0.36
COL5A1-201ENST00000371817 INS-IGF2F8WCM5 200 aa12.77□□□□□ -0.37
COL5A1-201ENST00000371817 INSP01308 110 aa12.77□□□□□ -0.37
COL5A1-201ENST00000371817 CDKN1AP38936 164 aa12.77□□□□□ -0.37
COL5A1-201ENST00000371817 RAMP3O60896 148 aa12.77□□□□□ -0.37
COL5A1-201ENST00000371817 IQCF6A8MYZ5 107 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 DRD3P35462 400 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 FBXL7Q9UJT9 491 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 TRAV41A0A0B4J266 112 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 MYMXA0A1B0GTQ4 84 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 TCF15Q12870 199 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 C1QL2Q7Z5L3 287 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 DCTN5Q9BTE1 182 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM131Q92545 1883 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 CRYBA2P53672 197 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 PYYP10082 97 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 J3KT08 172 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 NRTNQ99748 197 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 TRAV13-1A0A0B4J241 112 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 TIMM21Q9BVV7 248 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 PVRIGQ6DKI7 326 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
COL5A1-201ENST00000371817 ZNF319Q9P2F9 582 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 ACP7Q6ZNF0 438 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 S4R3C0 116 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
COL5A1-201ENST00000371817 H0YIZ8 118 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 RNF125Q96EQ8 232 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 WFDC1Q9HC57 220 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 BHLHA9Q7RTU4 235 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 PILRAQ9UKJ1 303 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms