RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 HIST1H2BNQ99877 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BMQ99879 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 PLSCR4Q9NRQ2 329 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 IGHV1-3A0A0C4DH29 117 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 PSPNO60542 156 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 NPC2P61916 151 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 GGTLC1Q9BX51 225 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 SRRM5B3KS81 715 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 NCR2O95944 276 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 MPZP25189 248 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 PSG1P11464 419 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 PPBPP02775 128 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 C5orf24Q7Z6I8 188 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 TRAV3A0A0B4J244 114 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 A0A1B0GV72 72 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 F2Z2F3 143 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 ERVK11-1P61568 191 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 FXYD7P58549 80 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 NDPQ00604 133 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 TPTE2P1Q5T6R2 138 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 BRD3OSQ6XYD6 125 aa18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 SLC25A39Q9BZJ4 359 aaPredicted RBP18.23■□□□□ 0.51
TM9SF3-201ENST00000371142 FGF16O43320 207 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 MEGF9Q9H1U4 602 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 TMEM178BH3BS89 294 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 DPH3P1Q9H4G8 78 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 TET1Q8NFU7 2136 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 FAM186AA6NE01 2351 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 TMEM8BA6NDV4 472 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 Q0VFX4 171 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 MBD3L1Q8WWY6 194 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 LINC00158P58513 81 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 IFI27L1Q96BM0 104 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 AHCTF1Q8WYP5 2266 aa18.22■□□□□ 0.51
TM9SF3-201ENST00000371142 LINC00587B1AMM8 73 aa18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 HGFACQ04756 655 aa18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 CHCHD1Q96BP2 118 aaKnown RBP18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 RCHY1Q96PM5 261 aa18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 MGST2Q99735 147 aa18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 EFNA4P52798 201 aa18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 KLF17Q5JT82 389 aaPredicted RBP18.21■□□□□ 0.51
TM9SF3-201ENST00000371142 C5orf63A6NC05 138 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 GNLYP22749 145 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 RALGAPA1Q6GYQ0 2036 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 PLNP26678 52 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 KLHDC3Q9BQ90 382 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 LAGE3Q14657 143 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 HEPN1Q6WQI6 88 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 RIPPLY3P57055 190 aa18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 SRSF7Q16629 238 aaKnown RBP eCLIP18.2■□□□□ 0.5
TM9SF3-201ENST00000371142 IL18BPO95998 194 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 GAS1P54826 345 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 OR2K2Q8NGT1 345 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 LILRA1O75019 489 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 ZNF688P0C7X2 276 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 TDGF1P3P51864 188 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 ATP5L2Q7Z4Y8 100 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 CXCL1P09341 107 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 DMRTC2Q8IXT2 367 aaPredicted RBP18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 RFNGQ9Y644 331 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 D6R8Y8 96 aa18.19■□□□□ 0.5
TM9SF3-201ENST00000371142 RPL35AP18077 110 aaKnown RBP18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 DTX2Q86UW9 622 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 ORAOV1Q8WV07 137 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 IGHV3-53P01767 116 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 GREB1Q4ZG55 1949 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 A0A0G2JNJ9 132 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 PHLDA1Q8WV24 401 aaPredicted RBP18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 Q9UFV3 132 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 ESPL1Q14674 2120 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 H3BUX3 64 aa18.18■□□□□ 0.5
TM9SF3-201ENST00000371142 SUPT4H1P63272 117 aaKnown RBP18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 IGFL4Q6B9Z1 124 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 ZNF474Q6S9Z5 364 aaPredicted RBP18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 CLPSP04118 112 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 TCRAP04437 139 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 DSCR9P59020 149 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 S100A7L2Q5SY68 101 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 LYZL1Q6UWQ5 148 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 PRADC1Q9BSG0 188 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 CRIM1Q9NZV1 1036 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 ALPK2Q86TB3 2170 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 A0A1B0GWJ7 208 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 CEP290O15078 2479 aa18.17■□□□□ 0.5
TM9SF3-201ENST00000371142 NDUFAF3Q9BU61 184 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 SRSF6Q13247 344 aaKnown RBP18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 SLC25A48Q6ZT89 311 aaKnown RBP18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 LHFPL1Q86WI0 220 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 UBE2DNLQ8IWF7 75 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 IGKV1-5P01602 117 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 LOC285556D6RIA3 1793 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 ACTL10Q5JWF8 245 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 RNF144BQ7Z419 303 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 Q8TAT8 98 aa18.16■□□□□ 0.5
TM9SF3-201ENST00000371142 ZNF876PQ49A33 203 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms