RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 HSPB9Q9BQS6 159 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 NKX6-2Q9C056 277 aaPredicted RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 MAP1LC3BQ9GZQ8 125 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ELL3Q9HB65 397 aaPredicted RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 MMP26Q9NRE1 261 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 PLA2G2EQ9NZK7 142 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ATMQ13315 3056 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 FREM1Q5H8C1 2179 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 TRAV1-1A0A0B4J248 108 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 LOC100131303A0A0U1RQF7 123 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 H7C2Y5 167 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 M0R143 59 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 GEMIN2O14893 280 aaKnown RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 DEDDO75618 318 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ZNF491Q8N8L2 437 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 OR2T6Q8NHC8 308 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ITLN2Q8WWU7 325 aaPredicted RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 DEFB127Q9H1M4 99 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 NAA60Q9H7X0 242 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 MRPL16Q9NX20 251 aaKnown RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 LAMTOR2Q9Y2Q5 125 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 RBM7Q9Y580 266 aaKnown RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 A0A0U1RQV1 116 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ZNF850A8MQ14 1090 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 NXPH3O95157 252 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 FRMD6-AS1P0C7T7 363 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 SRPXP78539 464 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 SLC38A11Q08AI6 406 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 AWAT1Q58HT5 328 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 SPRNQ5BIV9 151 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 AKR1C8PQ5T2L2 129 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ZNF429Q86V71 674 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 PRIMA1Q86XR5 153 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 FTMTQ8N4E7 242 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 C11orf72Q8NBR9 251 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 BTF3L4Q96K17 158 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ATG5Q9H1Y0 275 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 LYRM2Q9NU23 88 aaPredicted RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 TAAR3PQ9P1P4 343 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 CACFD1Q9UGQ2 172 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 GVINP1Q7Z2Y8 2422 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 CR1P17927 2039 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 TENM4Q6N022 2769 aa3□□□□□ -1.93
MCF2-203ENST00000370576 hADV38S2A0JD32 116 aa3□□□□□ -1.93
MCF2-203ENST00000370576 C5orf49A4QMS7 147 aa3□□□□□ -1.93
MCF2-203ENST00000370576 OR2H2O95918 312 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PLGLB1Q02325 96 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TMEM241Q24JQ0 296 aa3□□□□□ -1.93
MCF2-203ENST00000370576 DPPA3Q6W0C5 159 aa3□□□□□ -1.93
MCF2-203ENST00000370576 ZNF645Q8N7E2 425 aa3□□□□□ -1.93
MCF2-203ENST00000370576 SLC35E1Q96K37 410 aa3□□□□□ -1.93
MCF2-203ENST00000370576 YPEL4Q96NS1 127 aa3□□□□□ -1.93
MCF2-203ENST00000370576 BBC3Q96PG8 261 aaPredicted RBP3□□□□□ -1.93
MCF2-203ENST00000370576 ZNF747Q9BV97 191 aa3□□□□□ -1.93
MCF2-203ENST00000370576 C7orf69Q9H7B7 122 aa3□□□□□ -1.93
MCF2-203ENST00000370576 KCNIP1Q9NZI2 227 aa3□□□□□ -1.93
MCF2-203ENST00000370576 MYO7BQ6PIF6 2116 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TMEM235A6NFC5 223 aa3□□□□□ -1.93
MCF2-203ENST00000370576 E7EQL1 145 aa3□□□□□ -1.93
MCF2-203ENST00000370576 IGLV1-47P01700 117 aa3□□□□□ -1.93
MCF2-203ENST00000370576 NPY1RP25929 384 aa3□□□□□ -1.93
MCF2-203ENST00000370576 HIST1H1AQ02539 215 aaPredicted RBP3□□□□□ -1.93
MCF2-203ENST00000370576 ZNF816Q0VGE8 651 aaPredicted RBP3□□□□□ -1.93
MCF2-203ENST00000370576 CLINT1Q14677 625 aa3□□□□□ -1.93
MCF2-203ENST00000370576 IGFBP7Q16270 282 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PIGYQ3MUY2 71 aa3□□□□□ -1.93
MCF2-203ENST00000370576 C11orf87Q6NUJ2 197 aa3□□□□□ -1.93
MCF2-203ENST00000370576 GOLT1AQ6ZVE7 132 aa3□□□□□ -1.93
MCF2-203ENST00000370576 OR4A5Q8NH83 315 aa3□□□□□ -1.93
MCF2-203ENST00000370576 NPRL2Q8WTW4 380 aa3□□□□□ -1.93
MCF2-203ENST00000370576 WDR13Q9H1Z4 485 aa3□□□□□ -1.93
MCF2-203ENST00000370576 EXOSC4Q9NPD3 245 aaKnown RBP3□□□□□ -1.93
MCF2-203ENST00000370576 COMMD9Q9P000 198 aa3□□□□□ -1.93
MCF2-203ENST00000370576 OR2W1Q9Y3N9 320 aa3□□□□□ -1.93
MCF2-203ENST00000370576 GCN1Q92616 2671 aaKnown RBP3□□□□□ -1.93
MCF2-203ENST00000370576 TRAV26-2A0A0B4J265 109 aa3□□□□□ -1.93
MCF2-203ENST00000370576 IGKV1D-13A0A0B4J2D9 117 aa3□□□□□ -1.93
MCF2-203ENST00000370576 FAM240AA0A1B0GVK7 77 aa3□□□□□ -1.93
MCF2-203ENST00000370576 EEF1E1-BLOC1S5C9J1V9 151 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TMEM250H0YL14 139 aa3□□□□□ -1.93
MCF2-203ENST00000370576 K7ERU9 68 aa3□□□□□ -1.93
MCF2-203ENST00000370576 HMGB3O15347 200 aaKnown RBP3□□□□□ -1.93
MCF2-203ENST00000370576 MPPED1O15442 326 aa3□□□□□ -1.93
MCF2-203ENST00000370576 CREBL2O60519 120 aaPredicted RBP3□□□□□ -1.93
MCF2-203ENST00000370576 IGLV2-23P01705 113 aa3□□□□□ -1.93
MCF2-203ENST00000370576 IGKV1-13P0DP09 117 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PFN2P35080 140 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PMAIP1Q13794 54 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TMEM14EPQ6UXP3 125 aa3□□□□□ -1.93
MCF2-203ENST00000370576 Q6ZVQ6 151 aa3□□□□□ -1.93
MCF2-203ENST00000370576 OR4S1Q8NGB4 309 aa3□□□□□ -1.93
MCF2-203ENST00000370576 C2orf50Q96LR7 162 aa3□□□□□ -1.93
MCF2-203ENST00000370576 RNF5Q99942 180 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TM2D3Q9BRN9 247 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PRSS22Q9GZN4 317 aa3□□□□□ -1.93
MCF2-203ENST00000370576 SPANXCQ9NY87 97 aa3□□□□□ -1.93
MCF2-203ENST00000370576 TIMM9Q9Y5J7 89 aa3□□□□□ -1.93
MCF2-203ENST00000370576 PTPRZ1P23471 2315 aaPredicted RBP3□□□□□ -1.93
MCF2-203ENST00000370576 CELSR3Q9NYQ7 3312 aa3□□□□□ -1.93
MCF2-203ENST00000370576 LOC400499M0QZD8 3231 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms