RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
VMA21-202ENST00000370361 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
VMA21-202ENST00000370361 IFNA10P01566 189 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 IL4P05112 153 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 Q8NAQ8 132 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 NRN1Q9NPD7 142 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 FBXL17Q9UF56 701 aa11.77□□□□□ -0.53
VMA21-202ENST00000370361 EPPK1P58107 5090 aaKnown RBP11.76□□□□□ -0.53
VMA21-202ENST00000370361 NAP1L6A6NFF2 107 aa11.76□□□□□ -0.53
VMA21-202ENST00000370361 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
VMA21-202ENST00000370361 NANOS2P60321 138 aaKnown RBP11.76□□□□□ -0.53
VMA21-202ENST00000370361 TRIQKQ629K1 86 aa11.76□□□□□ -0.53
VMA21-202ENST00000370361 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
VMA21-202ENST00000370361 HYDINQ4G0P3 5121 aa11.76□□□□□ -0.53
VMA21-202ENST00000370361 BIRC6Q9NR09 4857 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 BUB3O43684 328 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 SLC25A6P12236 298 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 INPP1P49441 399 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
VMA21-202ENST00000370361 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 NDUFB6O95139 128 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 NXPH3O95157 252 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 SFT2D2O95562 160 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 GIG44P09565 113 aaPredicted RBP11.74□□□□□ -0.53
VMA21-202ENST00000370361 IL7P13232 177 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 VAMP1P23763 118 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 PPP1R1AQ13522 171 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
VMA21-202ENST00000370361 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 SLC35E1Q96K37 410 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
VMA21-202ENST00000370361 MED6O75586 246 aa11.73□□□□□ -0.53
VMA21-202ENST00000370361 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
VMA21-202ENST00000370361 PSG1P11464 419 aa11.73□□□□□ -0.53
VMA21-202ENST00000370361 BTCP35070 178 aa11.73□□□□□ -0.53
VMA21-202ENST00000370361 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
VMA21-202ENST00000370361 UBE2MP61081 183 aaKnown RBP11.73□□□□□ -0.53
VMA21-202ENST00000370361 RAB11AP62491 216 aa11.73□□□□□ -0.53
VMA21-202ENST00000370361 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
VMA21-202ENST00000370361 OR1S1Q8NH92 325 aa11.73□□□□□ -0.53
VMA21-202ENST00000370361 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
VMA21-202ENST00000370361 IGHV4-28A0A0C4DH34 117 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 PITX3O75364 302 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 C4BPBP20851 252 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 S100A7P31151 101 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 SPATA31B1PQ5VZV4 182 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 CIB3Q96Q77 187 aaPredicted RBP11.72□□□□□ -0.53
VMA21-202ENST00000370361 RBKSQ9H477 322 aa11.72□□□□□ -0.53
VMA21-202ENST00000370361 TRAV10A0A0B4J240 114 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 CENPXA8MT69 81 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 ID1P41134 155 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 CSNK1G2-AS1Q8NCQ2 148 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 FLVCR2Q9UPI3 526 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
VMA21-202ENST00000370361 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 A6NHS1 94 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 SNRPGP15A8MWD9 76 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 H3BMM0 161 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 PLA2G10O15496 165 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 PSMB3P49720 205 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 LINC00299Q6ZSB3 139 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 TRGV9Q99603 122 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 X6R8D5 127 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 AGRNO00468 2067 aa11.7□□□□□ -0.54
VMA21-202ENST00000370361 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 TMEM189A5PLL7 270 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 DEFB4AO15263 64 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
VMA21-202ENST00000370361 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 GAMTQ14353 236 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
VMA21-202ENST00000370361 NEU1Q99519 415 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 RNF126Q9BV68 326 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 SLC45A2Q9UMX9 530 aa11.69□□□□□ -0.54
VMA21-202ENST00000370361 IGLL5B9A064 214 aa11.68□□□□□ -0.54
VMA21-202ENST00000370361 HOXB5P09067 269 aa11.68□□□□□ -0.54
VMA21-202ENST00000370361 OR4E1P0C645 316 aa11.68□□□□□ -0.54
VMA21-202ENST00000370361 MEOX2P50222 304 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms