RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 PVRIGQ6DKI7 326 aa9.21□□□□□ -0.93
COL11A1-203ENST00000370096 C8orf46Q8TAG6 207 aa9.21□□□□□ -0.93
COL11A1-203ENST00000370096 NHSQ6T4R5 1651 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 CSTL1Q9H114 145 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 COLQQ9Y215 455 aaPredicted RBP9.21□□□□□ -0.94
COL11A1-203ENST00000370096 LINC00312Q9Y6C7 94 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 PAX8Q06710 450 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 QSER1Q2KHR3 1735 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 PPBPP02775 128 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 BTCP35070 178 aa9.21□□□□□ -0.94
COL11A1-203ENST00000370096 RBMY1FQ15415 496 aaKnown RBP9.2□□□□□ -0.94
COL11A1-203ENST00000370096 TMEM219Q86XT9 240 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 TMEM158Q8WZ71 300 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 MLNRO43193 412 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 SAP25Q8TEE9 199 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 LRP5O75197 1615 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 TCF15Q12870 199 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 ERCC8Q13216 396 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 SRSF7Q16629 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL11A1-203ENST00000370096 Q8TAT8 98 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 H0YIZ8 118 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 SMIM10L1P0DMW3 83 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 SMIM10Q96HG1 83 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 LYZL4Q96KX0 146 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 C1QTNF5Q9BXJ0 243 aa9.2□□□□□ -0.94
COL11A1-203ENST00000370096 SAP30O75446 220 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 ZNF497Q6ZNH5 498 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 NEU4Q8WWR8 484 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-203ENST00000370096 UBE2E2Q96LR5 201 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 A0A087WWL8 130 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 SH2D1AO60880 128 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 C1orf194Q5T5A4 169 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 RASL10AQ92737 203 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 MPDZO75970 2070 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 HGFACQ04756 655 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 LY6G6FQ5SQ64 297 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 CHCHD2Q9Y6H1 151 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-203ENST00000370096 RGPD3A6NKT7 1758 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-203ENST00000370096 TRBV6-7A0A0A0MS04 114 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 KLF17Q5JT82 389 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-203ENST00000370096 PPP1R32Q7Z5V6 425 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 TRAV12-1A0A0B4J245 112 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 TIMM23O14925 209 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 DEFB121Q5J5C9 76 aa9.19□□□□□ -0.94
COL11A1-203ENST00000370096 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
COL11A1-203ENST00000370096 ABHD17AQ96GS6 310 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 CTHRC1Q96CG8 243 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 PRSS22Q9GZN4 317 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 NEUROG3Q9Y4Z2 214 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 C17orf100A8MU93 164 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 C3orf79P0CE67 100 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 COLCA2A8K830 154 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 YPEL1O60688 119 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 FCN3O75636 299 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 STPG4Q8N801 248 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 TMEM133Q9H2Q1 129 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 SMPXQ9UHP9 88 aa9.18□□□□□ -0.94
COL11A1-203ENST00000370096 DLEC1Q9Y238 1755 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 KLRD1Q13241 179 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 C10orf55Q5SWW7 151 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 TRAV40A0A0B4J280 105 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 F8VVB4 439 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 F8VWA3 439 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 DNAJC30Q96LL9 226 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 HEATR1Q9H583 2144 aaKnown RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 SRRM4A7MD48 611 aaKnown RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 OVOL1O14753 267 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 H3BMM0 161 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 TIMM21Q9BVV7 248 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 YLPM1P49750 1951 aaKnown RBP9.17□□□□□ -0.94
COL11A1-203ENST00000370096 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
COL11A1-203ENST00000370096 IGKV1D-8A0A087WSZ0 117 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 SYS1-DBNDD2H3BUS1 97 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 PRB2P02812 416 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-203ENST00000370096 IGFBP3P17936 291 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-203ENST00000370096 GLRX5Q86SX6 157 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 SNHG12Q9BXW3 62 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 DOCK7Q96N67 2140 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 TRAV25A0A0B4J276 109 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 NABP1Q96AH0 204 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 A0A1B0GTI1 187 aa9.16□□□□□ -0.94
COL11A1-203ENST00000370096 PRCDQ00LT1 54 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms