RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TIGITQ495A1 244 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 GDF5OSQ5U4N7 250 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 TMEM88Q6PEY1 159 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 H2BFWTQ7Z2G1 175 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 TBC1D26Q86UD7 250 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 FAM210BQ96KR6 192 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.66
SSR4-204ENST00000370087 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 CLN5O75503 358 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 B3GALNT1O75752 331 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
SSR4-204ENST00000370087 RND3P61587 244 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 FAAP20Q6NZ36 180 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 OR51S1Q8NGJ8 323 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 TRIM63Q969Q1 353 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 NEU1Q99519 415 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 C1QTNF4Q9BXJ3 329 aa10.89□□□□□ -0.67
SSR4-204ENST00000370087 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
SSR4-204ENST00000370087 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 NAP1L6A6NFF2 107 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 ATG12O94817 140 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 PIGPP57054 158 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 KLF9Q13886 244 aaPredicted RBP10.88□□□□□ -0.67
SSR4-204ENST00000370087 OR13C8Q8NGS7 320 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 MARCH1Q8TCQ1 289 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 NIPSNAP3BQ9BS92 247 aa10.88□□□□□ -0.67
SSR4-204ENST00000370087 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
SSR4-204ENST00000370087 FAT1Q14517 4588 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 IGKV1-5P01602 117 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 IGKV3-20P01619 116 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 HLA-DRB4P13762 266 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 OR4X1Q8NH49 305 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 SLC25A21Q9BQT8 299 aaPredicted RBP10.87□□□□□ -0.67
SSR4-204ENST00000370087 C7orf50Q9BRJ6 194 aaKnown RBP10.87□□□□□ -0.67
SSR4-204ENST00000370087 CCDC32Q9BV29 185 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 HLA-DRB4X5D2U9 266 aa10.87□□□□□ -0.67
SSR4-204ENST00000370087 A0A0B4J293 547 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 TEX13DA0A0J9YY54 714 aaPredicted RBP10.86□□□□□ -0.67
SSR4-204ENST00000370087 P0C879 139 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 SNCAP37840 140 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 OPRK1P41145 380 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 USF2Q15853 346 aaPredicted RBP10.86□□□□□ -0.67
SSR4-204ENST00000370087 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 KCNIP3Q9Y2W7 256 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 RFNGQ9Y644 331 aa10.86□□□□□ -0.67
SSR4-204ENST00000370087 PIGBOS1A0A0B4J2F0 54 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 C3orf85A0A1B0GTC6 90 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 TMEM189A5PLL7 270 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 INS-IGF2F8WCM5 200 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 IL7P13232 177 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 PI3P19957 117 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 NUTF2P61970 127 aaKnown RBP10.85□□□□□ -0.67
SSR4-204ENST00000370087 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 BAK1Q16611 211 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 NARS2Q96I59 477 aaKnown RBP10.85□□□□□ -0.67
SSR4-204ENST00000370087 GPR132Q9UNW8 380 aa10.85□□□□□ -0.67
SSR4-204ENST00000370087 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
SSR4-204ENST00000370087 IGLC1P0CG04 106 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 ANXA3P12429 323 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 C6orf223Q8N319 242 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
SSR4-204ENST00000370087 YTHDF2Q9Y5A9 579 aaKnown RBP10.84□□□□□ -0.67
SSR4-204ENST00000370087 A0A0G2JRQ6 117 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 CORTO00230 105 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 HOXA1P49639 335 aaPredicted RBP10.83□□□□□ -0.68
SSR4-204ENST00000370087 EIF2B2P49770 351 aaKnown RBP10.83□□□□□ -0.68
SSR4-204ENST00000370087 SNRPD3P62318 126 aaKnown RBP10.83□□□□□ -0.68
SSR4-204ENST00000370087 DHODHQ02127 395 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 OXA1LQ15070 435 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 TRIM16LQ309B1 348 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 BSXQ3C1V8 233 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 SPATA12Q7Z6I5 190 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 ZNRF2Q8NHG8 242 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 SLC35B3Q9H1N7 401 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
SSR4-204ENST00000370087 LOC102723971A0A1B0GUV8 181 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 LINC00854A0A1B0GVQ3 168 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 AKR1C2P52895 323 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 RNASE11Q8TAA1 199 aaKnown RBP10.82□□□□□ -0.68
SSR4-204ENST00000370087 SDHCQ99643 169 aaPredicted RBP10.82□□□□□ -0.68
SSR4-204ENST00000370087 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
SSR4-204ENST00000370087 TMED3Q9Y3Q3 217 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 MYCBP2O75592 4640 aa10.82□□□□□ -0.68
SSR4-204ENST00000370087 TEX48A0A1B0GUV7 120 aa10.81□□□□□ -0.68
SSR4-204ENST00000370087 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
SSR4-204ENST00000370087 AKR1C4P17516 323 aa10.81□□□□□ -0.68
SSR4-204ENST00000370087 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
SSR4-204ENST00000370087 RND2P52198 227 aa10.81□□□□□ -0.68
SSR4-204ENST00000370087 AP2S1P53680 142 aaPredicted RBP10.81□□□□□ -0.68
SSR4-204ENST00000370087 SUB1P53999 127 aaKnown RBP eCLIP10.81□□□□□ -0.68
SSR4-204ENST00000370087 FAM3BP58499 235 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms