RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 RIF1Q5UIP0 2472 aaKnown RBP9.95□□□□□ -0.82
PHGDH-201ENST00000369407 MOSP00540 346 aa9.95□□□□□ -0.82
PHGDH-201ENST00000369407 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
PHGDH-201ENST00000369407 C10orf113Q5VZT2 155 aa9.95□□□□□ -0.82
PHGDH-201ENST00000369407 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
PHGDH-201ENST00000369407 CSMD1Q96PZ7 3565 aa9.95□□□□□ -0.82
PHGDH-201ENST00000369407 INTS1Q8N201 2190 aaKnown RBP9.94□□□□□ -0.82
PHGDH-201ENST00000369407 PGPA6NDG6 321 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 AZU1P20160 251 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 PLP1P60201 277 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 SCGB2A2Q13296 93 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 Q6ZT83 130 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 MDS2Q8NDY4 140 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 IGHV1-18A0A0C4DH31 117 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 PPP1R35Q8TAP8 253 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 ITLN1Q8WWA0 313 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 CCL13Q99616 98 aa9.94□□□□□ -0.82
PHGDH-201ENST00000369407 PSMB11A5LHX3 300 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 H3BUT2 72 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 KLK10O43240 276 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 HIST1H1EP10412 219 aaKnown RBP9.93□□□□□ -0.82
PHGDH-201ENST00000369407 LINC00305Q7Z4B0 112 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 KBTBD11-OT1A0A1B0GTJ5 212 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 C7orf71A4D174 169 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 OR2J3O76001 311 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 HBBP68871 147 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 TEX45Q8NA69 505 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 FXYD5Q96DB9 178 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 TMEM177Q53S58 311 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-201ENST00000369407 C9orf106Q8NAJ2 232 aa9.93□□□□□ -0.82
PHGDH-201ENST00000369407 A0A1B0GXF2 115 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 KIR2DL2P43627 348 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-201ENST00000369407 RHOGP84095 191 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 RBMXL3Q8N7X1 1067 aaKnown RBP9.92□□□□□ -0.82
PHGDH-201ENST00000369407 STXBP6Q8NFX7 210 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 HARBI1Q96MB7 349 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 CGB3P0DN86 165 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 CGB7P0DN87 165 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 LGALS7P47929 136 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 RBPJQ06330 500 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 DIAPH2-AS1Q14236 149 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 C7orf69Q9H7B7 122 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 ST20Q9HBF5 79 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
PHGDH-201ENST00000369407 PTPRZ1P23471 2315 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-201ENST00000369407 RAB9AP51151 201 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 DEFB125Q8N687 156 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 MRPL20Q9BYC9 149 aaKnown RBP9.91□□□□□ -0.82
PHGDH-201ENST00000369407 SPRY4Q9C004 299 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 RTL8BQ17RB0 113 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 ZNF788Q6ZQV5 615 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 PDPNQ86YL7 162 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 RPP21Q9H633 154 aaKnown RBP9.91□□□□□ -0.82
PHGDH-201ENST00000369407 EPDR1Q9UM22 224 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 ZNF835Q9Y2P0 537 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 TACC2O95359 2948 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 A0A1B0GV72 72 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 P01737 135 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 MEF2CQ06413 473 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-201ENST00000369407 HCP5Q6MZN7 132 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 FLYWCH2Q96CP2 140 aaKnown RBP9.91□□□□□ -0.82
PHGDH-201ENST00000369407 PERPQ96FX8 193 aa9.91□□□□□ -0.82
PHGDH-201ENST00000369407 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
PHGDH-201ENST00000369407 ADGRG4Q8IZF6 3080 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 CHEK1O14757 476 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 FXYD7P58549 80 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 CIARTQ8N365 385 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-201ENST00000369407 TMEM191AQ9H0A3 160 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.82
PHGDH-201ENST00000369407 IGKV1D-37A0A075B6S9 117 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 FNDC10F2Z333 226 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 M0R1B8 84 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 DLL1O00548 723 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 NCR2O95944 276 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 ERHP84090 104 aaKnown RBP9.9□□□□□ -0.82
PHGDH-201ENST00000369407 CR1LQ2VPA4 569 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 FAM71F2Q6NXP2 309 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 C19orf24Q9BVV8 132 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 TPPP3Q9BW30 176 aa9.9□□□□□ -0.82
PHGDH-201ENST00000369407 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
PHGDH-201ENST00000369407 FAM87AP0C7U9 286 aa9.89□□□□□ -0.83
PHGDH-201ENST00000369407 OR1L8Q8NGR8 309 aa9.89□□□□□ -0.83
PHGDH-201ENST00000369407 MAP1LC3CQ9BXW4 147 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms