RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NPY1RP25929 384 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
TPM3-212ENST00000368533 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.032e-7■□□□□ 8.7
TPM3-212ENST00000368533 RAB31Q13636 194 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 CR1LQ2VPA4 569 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 HLA-DRB5Q30154 266 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 ZNF439Q8NDP4 499 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 OR8B3Q8NGG8 313 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 TIMD4Q96H15 378 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 UHRF2Q96PU4 802 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 OR8B2Q96RD0 313 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 MGST2Q99735 147 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 CT45A6P0DMU7 189 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 CT45A5P0DMU8 189 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 CT45A7P0DMV0 189 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 IGHV1-8P0DP01 117 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 RAB1CQ92928 201 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 MDFIC2A0A1B0GVS7 189 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SRRM4A7MD48 611 aaKnown RBP8.59□□□□□ -1.03
TPM3-212ENST00000368533 PDE6DO43924 150 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 LHFPL4Q7Z7J7 247 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SLC24A4Q8NFF2 622 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 PERPQ96FX8 193 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 RITA1Q96K30 269 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 NCOR1P1Q9H4R4 102 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 NPVFQ9HCQ7 196 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SLC35D1Q9NTN3 355 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 HILPDAQ9Y5L2 63 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 CA2P00918 260 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 VWC2Q2TAL6 325 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 TMEM155Q4W5P6 130 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SPATA31B1PQ5VZV4 182 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 PRR27Q6MZM9 219 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
TPM3-212ENST00000368533 OR4P4Q8NGL7 312 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.03
TPM3-212ENST00000368533 IGHV3OR16-10A0A075B7F0 116 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 ZFP36P26651 326 aaKnown RBP8.58□□□□□ -1.04
TPM3-212ENST00000368533 VDAC2P45880 294 aaPredicted RBP8.58□□□□□ -1.04
TPM3-212ENST00000368533 Q56UQ5 140 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 NOTCH2Q04721 2471 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 ABCA2Q9BZC7 2435 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 J3QR06 171 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 MPDU1O75352 247 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 CXorf1O96002 111 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 OPRK1P41145 380 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 TEPPQ6URK8 271 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 OR51B2Q9Y5P1 312 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 TRAV30A0A087WSZ9 112 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 ZNF253O75346 499 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 KIR2DS2P43631 304 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 TCL1AP56279 114 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 HSPE1P61604 102 aaKnown RBP8.58□□□□□ -1.04
TPM3-212ENST00000368533 MEF2CQ06413 473 aaPredicted RBP8.58□□□□□ -1.04
TPM3-212ENST00000368533 DTX2Q86UW9 622 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 STPG3Q8N7X2 389 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 CORO2AQ92828 525 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 RAB9BQ9NP90 201 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 WASHC3Q9Y3C0 194 aa8.58□□□□□ -1.04
TPM3-212ENST00000368533 A0A1W2PS18 150 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 FOXH1O75593 365 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 VENTXO95231 258 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 IGHV4-39P01824 125 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 IGFBP2P18065 325 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 GATA2P23769 480 aaPredicted RBP8.57□□□□□ -1.04
TPM3-212ENST00000368533 CNTFRP26992 372 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 C10orf55Q5SWW7 151 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 MAPK1IP1LQ8NDC0 245 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 FAM216AQ8WUB2 273 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 CCL19Q99731 98 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 SSBP3Q9BWW4 388 aaPredicted RBP8.57□□□□□ -1.04
TPM3-212ENST00000368533 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 KAAG1Q9UBP8 84 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 DLX6P56179 175 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 RHOBP62745 196 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 MOB3BQ86TA1 216 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 Q8N7P7 452 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 CLEC7AQ9BXN2 247 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 TMEM133Q9H2Q1 129 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 NAT8BQ9UHF3 227 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 HECTD1Q9ULT8 2610 aa8.57□□□□□ -1.04
TPM3-212ENST00000368533 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 IGHV2-26A0A0B4J1V2 119 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 OR7C2O60412 319 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 YPEL3P61236 119 aaPredicted RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 FOXL1Q12952 345 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 IGHV3-48P01763 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms