RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 IFNA7P01567 189 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 IFNA4P05014 189 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 METTL15P1P0C7V9 234 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 CIB3Q96Q77 187 aaPredicted RBP11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 C20orf24Q9BUV8 137 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 SLC25A31Q9H0C2 315 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 WFDC1Q9HC57 220 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 MLXQ9UH92 298 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
SMPDL3A-201ENST00000368440 GP9P14770 177 aa11.4□□□□□ -0.59
SMPDL3A-201ENST00000368440 RELQ04864 619 aaPredicted RBP11.4□□□□□ -0.59
SMPDL3A-201ENST00000368440 DEFB114Q30KQ6 69 aa11.4□□□□□ -0.59
SMPDL3A-201ENST00000368440 CD300EQ496F6 205 aaPredicted RBP11.4□□□□□ -0.59
SMPDL3A-201ENST00000368440 UBQLN2Q9UHD9 624 aa11.4□□□□□ -0.59
SMPDL3A-201ENST00000368440 YIF1AO95070 293 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGKV1-17P01599 117 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 C8orf88P0DMB2 117 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 ELLP55199 621 aaPredicted RBP11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 TIGITQ495A1 244 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 FAM74A1Q5RGS3 127 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 STX12Q86Y82 276 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 ACY3Q96HD9 319 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 ZFAND3Q9H8U3 227 aa11.39□□□□□ -0.59
SMPDL3A-201ENST00000368440 PRSS46E5RG02 174 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGLC1P0CG04 106 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 TPT1P13693 172 aaKnown RBP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 OR8G2PQ6IF36 304 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 BTNL8Q6UX41 500 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 ZNF600Q6ZNG1 722 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 TAAR5O14804 337 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 RAB11AP62491 216 aa11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 STRAPQ9Y3F4 350 aaKnown RBP11.38□□□□□ -0.59
SMPDL3A-201ENST00000368440 SORL1Q92673 2214 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 K7EMT4 169 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 OR10J1P30954 320 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 SULT1A1P50225 295 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 GAMTQ14353 236 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 BAP18Q8IXM2 172 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
SMPDL3A-201ENST00000368440 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 TAS2R30P59541 319 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 RPP30P78346 268 aaKnown RBP11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 DEFB121Q5J5C9 76 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 HSD17B11Q8NBQ5 300 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 TMED6Q8WW62 240 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 MARC2Q969Z3 335 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 TECRQ9NZ01 308 aaKnown RBP11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 BORCS7-ASMTA0A0B4J1R7 106 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 ZNF785A8K8V0 405 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 PMS2P5A8MQ11 134 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 BAXQ07812 192 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 LILRB2Q8N423 598 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGKV1D-37A0A075B6S9 117 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGHV7-4-1A0A0J9YVY3 117 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 JTBO76095 146 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 STOML3Q8TAV4 291 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
SMPDL3A-201ENST00000368440 SCAF4O95104 1147 aaKnown RBP11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 RAB14P61106 215 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 Q8N1Y9 231 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 RFNGQ9Y644 331 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 SLC38A11Q08AI6 406 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 ATP5SQ99766 215 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
SMPDL3A-201ENST00000368440 CHEK1O14757 476 aa11.33□□□□□ -0.6
SMPDL3A-201ENST00000368440 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
SMPDL3A-201ENST00000368440 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
SMPDL3A-201ENST00000368440 HBG1P69891 147 aa11.33□□□□□ -0.6
SMPDL3A-201ENST00000368440 HBG2P69892 147 aa11.33□□□□□ -0.6
SMPDL3A-201ENST00000368440 ZNF90Q03938 601 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms