RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZFAND6Q6FIF0 208 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 DCANP1Q8TF63 244 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 SLC35E1Q96K37 410 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 C20orf85Q9H1P6 137 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 TP53TG1Q9Y2A0 90 aa13.96□□□□□ -0.17
CKS1B-203ENST00000368439 AGRNO00468 2067 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 IGKV1OR2-108A0A075B7D4 117 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 BUB3O43684 328 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 OR51G1Q8NGK1 321 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 MITD1Q8WV92 249 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 NARS2Q96I59 477 aaKnown RBP13.95□□□□□ -0.18
CKS1B-203ENST00000368439 CCDC32Q9BV29 185 aa13.95□□□□□ -0.18
CKS1B-203ENST00000368439 TCRBP04435 133 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 DEFB131AP59861 70 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 POLR2GP62487 172 aaKnown RBP eCLIP13.94□□□□□ -0.18
CKS1B-203ENST00000368439 STPG3Q8N7X2 389 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 THAP8Q8NA92 274 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 STXBP6Q8NFX7 210 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 RNF183Q96D59 192 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 RNF125Q96EQ8 232 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 TENM2Q9NT68 2774 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 RABAC1Q9UI14 185 aa13.94□□□□□ -0.18
CKS1B-203ENST00000368439 ZFP92A6NM28 416 aa13.93□□□□□ -0.18
CKS1B-203ENST00000368439 SPRY2O43597 315 aa13.93□□□□□ -0.18
CKS1B-203ENST00000368439 IFNA21P01568 189 aa13.93□□□□□ -0.18
CKS1B-203ENST00000368439 RPP30P78346 268 aaKnown RBP13.93□□□□□ -0.18
CKS1B-203ENST00000368439 LEMD1Q68G75 181 aa13.93□□□□□ -0.18
CKS1B-203ENST00000368439 TRGV9Q99603 122 aa13.93□□□□□ -0.18
CKS1B-203ENST00000368439 PAIP2BQ9ULR5 123 aaKnown RBP13.93□□□□□ -0.18
CKS1B-203ENST00000368439 HELTA6NFD8 242 aa13.92□□□□□ -0.18
CKS1B-203ENST00000368439 H3BP45 60 aa13.92□□□□□ -0.18
CKS1B-203ENST00000368439 NKX2-1P43699 371 aaPredicted RBP13.92□□□□□ -0.18
CKS1B-203ENST00000368439 PAX9P55771 341 aa13.92□□□□□ -0.18
CKS1B-203ENST00000368439 SPANXN5Q5MJ07 72 aa13.92□□□□□ -0.18
CKS1B-203ENST00000368439 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
CKS1B-203ENST00000368439 PMS2P5A8MQ11 134 aa13.91□□□□□ -0.18
CKS1B-203ENST00000368439 EIF2B2P49770 351 aaKnown RBP13.91□□□□□ -0.18
CKS1B-203ENST00000368439 OR8G2PQ6IF36 304 aa13.91□□□□□ -0.18
CKS1B-203ENST00000368439 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
CKS1B-203ENST00000368439 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
CKS1B-203ENST00000368439 DNAH1Q9P2D7 4330 aa13.91□□□□□ -0.18
CKS1B-203ENST00000368439 TRAV6A0A075B6T7 132 aa13.9□□□□□ -0.18
CKS1B-203ENST00000368439 ZNF688P0C7X2 276 aa13.9□□□□□ -0.18
CKS1B-203ENST00000368439 AP2S1P53680 142 aaPredicted RBP13.9□□□□□ -0.18
CKS1B-203ENST00000368439 IAH1Q2TAA2 248 aaPredicted RBP13.9□□□□□ -0.18
CKS1B-203ENST00000368439 ZBTB8BQ8NAP8 495 aaPredicted RBP13.9□□□□□ -0.18
CKS1B-203ENST00000368439 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
CKS1B-203ENST00000368439 SMIM8Q96KF7 97 aa13.9□□□□□ -0.18
CKS1B-203ENST00000368439 SSSCA1O60232 199 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 EWSR1Q01844 656 aaKnown RBP eCLIP13.89□□□□□ -0.19
CKS1B-203ENST00000368439 OR2F1Q13607 317 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 PBDC1Q9BVG4 233 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 NUDT15Q9NV35 164 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 PSENENQ9NZ42 101 aa13.89□□□□□ -0.19
CKS1B-203ENST00000368439 A0A0J9YWU9 116 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 SNRPGP15A8MWD9 76 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 CCNKO75909 580 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 FABP1P07148 127 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 LYZP61626 148 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 TMEM14EPQ6UXP3 125 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 TMEM182Q6ZP80 229 aaPredicted RBP13.88□□□□□ -0.19
CKS1B-203ENST00000368439 ACOT7LQ6ZUV0 252 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 TRPT1Q86TN4 253 aaKnown RBP13.88□□□□□ -0.19
CKS1B-203ENST00000368439 IL17DQ8TAD2 202 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 SEC22CQ9BRL7 303 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 NRN1Q9NPD7 142 aa13.88□□□□□ -0.19
CKS1B-203ENST00000368439 RCL1Q9Y2P8 373 aaKnown RBP13.88□□□□□ -0.19
CKS1B-203ENST00000368439 CCSO14618 274 aa13.87□□□□□ -0.19
CKS1B-203ENST00000368439 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
CKS1B-203ENST00000368439 ASAH1Q13510 395 aa13.87□□□□□ -0.19
CKS1B-203ENST00000368439 ZNF431Q8TF32 576 aaPredicted RBP13.87□□□□□ -0.19
CKS1B-203ENST00000368439 SEPSECSQ9HD40 501 aaKnown RBP13.87□□□□□ -0.19
CKS1B-203ENST00000368439 HYDINQ4G0P3 5121 aa13.87□□□□□ -0.19
CKS1B-203ENST00000368439 KNCNA6PVL3 124 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 SCGB1D2O95969 90 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 MBPP02686 304 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-203ENST00000368439 H2AFB2P0C5Z0 115 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 NUP62P37198 522 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-203ENST00000368439 TAS2R30P59541 319 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 TMEM144Q7Z5S9 345 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 GATAD1Q8WUU5 269 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 RAB40CQ96S21 281 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 PTTG2Q9NZH5 202 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
CKS1B-203ENST00000368439 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
CKS1B-203ENST00000368439 GATA2P23769 480 aaPredicted RBP13.85□□□□□ -0.19
CKS1B-203ENST00000368439 IFITM3Q01628 133 aa13.85□□□□□ -0.19
CKS1B-203ENST00000368439 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
CKS1B-203ENST00000368439 C1orf194Q5T5A4 169 aa13.85□□□□□ -0.19
CKS1B-203ENST00000368439 STHQ8IWL8 128 aa13.85□□□□□ -0.19
CKS1B-203ENST00000368439 ALMS1Q8TCU4 4167 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 LCE6AA0A183 80 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 FAM240BA0A1B0GVZ2 78 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 C7orf66A4D0T2 115 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 TSC22D2O75157 780 aa13.84□□□□□ -0.19
CKS1B-203ENST00000368439 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
CKS1B-203ENST00000368439 AKR1C1Q04828 323 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms