RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 DFFBO76075 338 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 TOMM40O96008 361 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 POLR2GP62487 172 aaKnown RBP eCLIP7.34□□□□□ -1.23
CD48-202ENST00000368046 ASAH1Q13510 395 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 SPANXN5Q5MJ07 72 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 ZNF431Q8TF32 576 aaPredicted RBP7.34□□□□□ -1.23
CD48-202ENST00000368046 NARS2Q96I59 477 aaKnown RBP7.34□□□□□ -1.23
CD48-202ENST00000368046 SLC35E1Q96K37 410 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 CITED4Q96RK1 184 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 PAIP2BQ9ULR5 123 aaKnown RBP7.34□□□□□ -1.23
CD48-202ENST00000368046 STRAPQ9Y3F4 350 aaKnown RBP7.34□□□□□ -1.23
CD48-202ENST00000368046 U3KQE9 123 aa7.34□□□□□ -1.23
CD48-202ENST00000368046 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 LOC102724200A0A096LPH7 203 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 IGHV3-66A0A0C4DH42 116 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 ZFP92A6NM28 416 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 DNASE2O00115 360 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 UPK1BO75841 260 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 HNRNPCP07910 306 aaKnown RBP eCLIP7.33□□□□□ -1.24
CD48-202ENST00000368046 PSG1P11464 419 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 IAH1Q2TAA2 248 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 C12orf45Q8N5I9 185 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
CD48-202ENST00000368046 OR51G1Q8NGK1 321 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 GRAMD2BQ96HH9 432 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 SMIM8Q96KF7 97 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 NUDT15Q9NV35 164 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 PSENENQ9NZ42 101 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 GSKIPQ9P0R6 139 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 TBC1D24Q9ULP9 559 aa7.33□□□□□ -1.24
CD48-202ENST00000368046 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 SNRPGP15A8MWD9 76 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 PRSS46E5RG02 174 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 IL4P05112 153 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 IL5P05113 134 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 FABP1P07148 127 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 TFPI2P48307 235 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 PAX9P55771 341 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 TAS2R30P59541 319 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 IFITM3Q01628 133 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 ZNF90Q03938 601 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 ODF3L2Q3SX64 289 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 GBGT1Q8N5D6 347 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 SEC22CQ9BRL7 303 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 PFDN2Q9UHV9 154 aa7.32□□□□□ -1.24
CD48-202ENST00000368046 IGKV1D-37A0A075B6S9 117 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 HELTA6NFD8 242 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 BUB3O43684 328 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 CFDP00746 253 aaPredicted RBP7.31□□□□□ -1.24
CD48-202ENST00000368046 P2RY1P47900 373 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 EIF2B2P49770 351 aaKnown RBP7.31□□□□□ -1.24
CD48-202ENST00000368046 USF2Q15853 346 aaPredicted RBP7.31□□□□□ -1.24
CD48-202ENST00000368046 C16orf54Q6UWD8 224 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 THAP8Q8NA92 274 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 RNF125Q96EQ8 232 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 TRGV9Q99603 122 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
CD48-202ENST00000368046 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 IGKV1OR2-108A0A075B7D4 117 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 KIR2DL5BA0A0G2JN68 375 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 KIR2DL5BA0A0G2JPC4 375 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 C5orf51A6NDU8 294 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 PMS2P5A8MQ11 134 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 H3BP45 60 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 UBE2CO00762 179 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 CCSO14618 274 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 SSSCA1O60232 199 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 TSC22D2O75157 780 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 MBPP02686 304 aaPredicted RBP7.3□□□□□ -1.24
CD48-202ENST00000368046 APOC4P55056 127 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 OR8G2PQ6IF36 304 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 TMEM14EPQ6UXP3 125 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 TMEM144Q7Z5S9 345 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 APRG1Q8IVJ8 170 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 KIR2DL5AQ8N109 375 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 KIR2DL5BQ8NHK3 375 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 ENKURQ8TC29 256 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 C2orf50Q96LR7 162 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 MAP6D1Q9H9H5 199 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 GPN1Q9HCN4 374 aaPredicted RBP7.3□□□□□ -1.24
CD48-202ENST00000368046 NPVFQ9HCQ7 196 aa7.3□□□□□ -1.24
CD48-202ENST00000368046 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
CD48-202ENST00000368046 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 FAM25EA8MYX2 175 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 C3orf84H3BNL1 204 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 K7EQG2 157 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 DEFA1P59665 94 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 DEFA3P59666 94 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 IL15RAQ13261 267 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 GSG1LQ6UXU4 331 aa7.29□□□□□ -1.24
CD48-202ENST00000368046 NRARPQ7Z6K4 114 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms