RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 F8WEM9 126 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 RBMY1DP0C7P1 496 aaKnown RBP7.23□□□□□ -1.25
SYNE1-206ENST00000367253 RBMY1A1P0DJD3 496 aaKnown RBP7.23□□□□□ -1.25
SYNE1-206ENST00000367253 MESP2Q0VG99 397 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 MSRB3Q8IXL7 192 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 LINC01555Q8NAE3 123 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 ZNF721Q8TF20 911 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 COL6A6A6NMZ7 2263 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 WNK2Q9Y3S1 2297 aa7.23□□□□□ -1.25
SYNE1-206ENST00000367253 VSIG8P0DPA2 414 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 ADMP35318 185 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 FOXA3P55318 350 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-206ENST00000367253 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 LINC01551Q86U37 167 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 TRGV11A0A075B6L2 103 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 PRSS29PA6NIE9 313 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 FOXS1O43638 330 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 CCL18P55774 89 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 FAM240AA0A1B0GVK7 77 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 CD160O95971 181 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 IGKV1D-33P01593 117 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 IGKV1-33P01594 117 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 RFPL3SP0C7P2 107 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 CRYBB3P26998 211 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 GAS1P54826 345 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 Q6ZVH6 145 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 KIR3DL3Q8N743 410 aa7.22□□□□□ -1.25
SYNE1-206ENST00000367253 OTOGLQ3ZCN5 2332 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 A0A1B0GTL3 188 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 CEACAM18A8MTB9 384 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 C8orf88P0DMB2 117 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 STPG4Q8N801 248 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 ESPL1Q14674 2120 aa7.21□□□□□ -1.25
SYNE1-206ENST00000367253 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 A0A087WWC5 75 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 H3BUX3 64 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 CX3CL1P78423 397 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 SRSF1Q07955 248 aaKnown RBP eCLIP7.21□□□□□ -1.26
SYNE1-206ENST00000367253 LINC01559Q495D7 138 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 ZNF585BQ52M93 769 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 RPL36A-HNRNPH2H7BZ11 118 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 CFHR2P36980 270 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 ASIPP42127 132 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 RPS11P62280 158 aaKnown RBP eCLIP7.21□□□□□ -1.26
SYNE1-206ENST00000367253 TMEM91Q6ZNR0 172 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 PRSS41Q7RTY9 318 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 GATD1Q8NB37 220 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 MUC6Q6W4X9 2439 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 APOHP02749 345 aaPredicted RBP7.21□□□□□ -1.26
SYNE1-206ENST00000367253 CECR9P0C854 216 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 GOLT1AQ6ZVE7 132 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 PIP4P2Q8N4L2 257 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 C9orf106Q8NAJ2 232 aa7.21□□□□□ -1.26
SYNE1-206ENST00000367253 TRAV41A0A0B4J266 112 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IGHV2-70DA0A0C4DH43 119 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 UPK3AO75631 287 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 CELA2AP08217 269 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 RBX1P62877 108 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 CYP2G1PQ6ZSU1 146 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 USMG5Q96IX5 58 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 TMEM222Q9H0R3 208 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 SLC25A15Q9Y619 301 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IGKV3-20P01619 116 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 REG1AP05451 166 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 ZNF708P17019 499 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 MIC13Q5XKP0 118 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 FAM90A26D6RGX4 464 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 H3BRM9 83 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 M0R1W7 72 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IFI6P09912 130 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 RPL35AP18077 110 aaKnown RBP7.2□□□□□ -1.26
SYNE1-206ENST00000367253 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 TMEM256Q8N2U0 113 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IGHV3-11P01762 117 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 EFNB1P98172 346 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 BCL6BQ8N143 479 aaPredicted RBP7.2□□□□□ -1.26
SYNE1-206ENST00000367253 IMMP2LQ96T52 175 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 C21orf62Q9NYP8 219 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 ALPK2Q86TB3 2170 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 DSPPQ9NZW4 1301 aa7.2□□□□□ -1.26
SYNE1-206ENST00000367253 PCM1Q15154 2024 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 A0A1B0GTI1 187 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 CENPWQ5EE01 88 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 PSG8Q9UQ74 426 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 GGTLC3B5MD39 225 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 C2orf82Q6UX34 121 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 OVOL1O14753 267 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 NBEAP1P0C6P0 100 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 NBR2O15453 112 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 CNTFRP26992 372 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 TMEM86BQ8N661 226 aa7.19□□□□□ -1.26
SYNE1-206ENST00000367253 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms