RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 APOA2P02652 100 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 FABP3P05413 133 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 KRT8P05787 483 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 CDK1P06493 297 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 UBCP0CG48 685 aaKnown RBP4.77□□□□□ -1.65
H3F3A-201ENST00000366813 CD36P16671 472 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 UCP1P25874 307 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 NCS1P62166 190 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 TIMM50Q3ZCQ8 353 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 TMEM69Q5SWH9 247 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 LINC00242Q5T6M2 205 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 GAPTQ8N292 157 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 IL1F10Q8WWZ1 152 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 GALMQ96C23 342 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 OR2A7Q96R45 310 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 GPER1Q99527 375 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 SPIN2AQ99865 258 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 SPIN2BQ9BPZ2 258 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 AGMATQ9BSE5 352 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 RHPN1-AS1Q9BWJ2 59 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 NRN1Q9NPD7 142 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 SMPXQ9UHP9 88 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 ZNF257Q9Y2Q1 563 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 GMPPBQ9Y5P6 360 aa4.77□□□□□ -1.65
H3F3A-201ENST00000366813 DNAH8Q96JB1 4490 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 TRBV7-1A0A0A6YYK4 115 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 ANXA8P13928 327 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 VBP1P61758 197 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 CLINT1Q14677 625 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 TMEM244Q5VVB8 128 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 TMEM236Q5W0B7 351 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 HS3ST5Q8IZT8 346 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 SDHCQ99643 169 aaPredicted RBP4.76□□□□□ -1.65
H3F3A-201ENST00000366813 ZNF430Q9H8G1 570 aaPredicted RBP4.76□□□□□ -1.65
H3F3A-201ENST00000366813 XCL2Q9UBD3 114 aa4.76□□□□□ -1.65
H3F3A-201ENST00000366813 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 EFCAB10A6NFE3 127 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 M0R1X1 148 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 BCL2L11O43521 198 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 APOA1P02647 267 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 HMGN1P05114 100 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 SERPINA2P20848 420 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 PTBP1P26599 531 aaKnown RBP eCLIP4.75□□□□□ -1.65
H3F3A-201ENST00000366813 PSMB9P28065 219 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 S100A5P33763 92 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 MPV17LQ2QL34 196 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 ACTL10Q5JWF8 245 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 ZNF502Q8TBZ5 544 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 MRPL30Q8TCC3 161 aaKnown RBP4.75□□□□□ -1.65
H3F3A-201ENST00000366813 PHYHIPQ92561 330 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 REEP1Q9H902 201 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 AMBNQ9NP70 447 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 DIABLOQ9NR28 239 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 CLN6Q9NWW5 311 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 RNF24Q9Y225 148 aa4.75□□□□□ -1.65
H3F3A-201ENST00000366813 IGHV3OR16-12A0A075B7B8 117 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 IGHV7-4-1A0A0J9YVY3 117 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 A0A1W2PQL4 384 aaPredicted RBP4.74□□□□□ -1.65
H3F3A-201ENST00000366813 OR2T8A6NH00 312 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 FAM25AB3EWG3 89 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 FAM25CB3EWG5 89 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 FAM25GB3EWG6 89 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 E7EUB6 86 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 K7EMT4 169 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 DNASE2O00115 360 aaPredicted RBP4.74□□□□□ -1.65
H3F3A-201ENST00000366813 GPX5O75715 221 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 HLA-DQB1P01920 261 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 GADD45AP24522 165 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 HLA-DMAP28067 261 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 DAD1P61803 113 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 PAFAH1B2P68402 229 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 ASAH1Q13510 395 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 GAMTQ14353 236 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 CDK10Q15131 360 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 YIF1BQ5BJH7 314 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 SPANXN2Q5MJ10 180 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 MEDAGQ5VYS4 303 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 NXNL2Q5VZ03 156 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 ATRAIDQ6UW56 229 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 TCF24Q7RTU0 167 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 OR51A2Q8NGJ7 313 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 OR2G2Q8NGZ5 317 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 RAB3CQ96E17 227 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 CCDC90BQ9GZT6 254 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 METTL9Q9H1A3 318 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 MS4A6AQ9H2W1 248 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 RIBC2Q9H4K1 309 aa4.74□□□□□ -1.65
H3F3A-201ENST00000366813 ISG20L2Q9H9L3 353 aaKnown RBP4.74□□□□□ -1.65
H3F3A-201ENST00000366813 SAMHD1Q9Y3Z3 626 aaKnown RBP4.74□□□□□ -1.65
H3F3A-201ENST00000366813 IGLV11-55A0A075B6I3 123 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 F5H768 121 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 NDUFA4O00483 81 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 CCNKO75909 580 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 KBTBD11O94819 623 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 ISG15P05161 165 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 M6PRP20645 277 aa4.73□□□□□ -1.65
H3F3A-201ENST00000366813 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
H3F3A-201ENST00000366813 GNG2P59768 71 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 635.3 ms