RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 WNT9BO14905 357 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 C1QTNF9P0C862 333 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 LIME1Q9H400 295 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TRAV21A0A0B4J279 112 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 UBE2L6O14933 153 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 DPM2O94777 84 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 AZU1P20160 251 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 CA7P43166 264 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 RPL27AP46776 148 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 STPG3Q8N7X2 389 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 CCL13Q99616 98 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 CRIM1Q9NZV1 1036 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TRAV2A0A0B4J234 112 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 PLAUP00749 431 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 SRSF6Q13247 344 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 OR9G1Q8NH87 305 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 DLX4Q92988 240 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TRAV12-3A0A0B4J271 114 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 FOXL1Q12952 345 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 C9orf106Q8NAJ2 232 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 KLF12Q9Y4X4 402 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 LINC00312Q9Y6C7 94 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 SELENOKQ9Y6D0 94 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 NCOA6Q14686 2063 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGHV1-18A0A0C4DH31 117 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 IFITM1P13164 125 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 FOXG1P55316 489 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 PAX9P55771 341 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM78Q5T7P6 136 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 C1orf122Q6ZSJ8 110 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 MRAPQ8TCY5 172 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 PGPEP1Q9NXJ5 209 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 RNF115Q9Y4L5 304 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 UPK2O00526 184 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TFF3Q07654 80 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 ATXN8Q156A1 80 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 C20orf144Q9BQM9 153 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 IFI27L2Q9H2X8 130 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 hDV102S1A0JD36 115 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 MLNRO43193 412 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 CGAP01215 116 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 FMC1Q96HJ9 113 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 SRCAPQ6ZRS2 3230 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 SPINK2P20155 84 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 TIMP3P35625 211 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 FAM57AQ8TBR7 257 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 SPAARA0A1B0GVQ0 90 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 FAM231BA6NCW3 169 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV3-15P01624 115 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 FOXA2Q9Y261 457 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 FREM1Q5H8C1 2179 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 HBDP02042 147 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 GPX1P07203 203 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 PSG3Q16557 428 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 GOLT1AQ6ZVE7 132 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 CENPVQ7Z7K6 275 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 CACNG7P62955 275 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 PRCDQ00LT1 54 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 C1RLQ9NZP8 487 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 MBD3L4A6NDZ8 208 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 MBD3L3A6NE82 208 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 MBD3L5A6NJ08 208 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 H3BRM9 83 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM256Q8N2U0 113 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 KIR3DL3Q8N743 410 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 MBD3L2Q8NHZ7 208 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 RNASE7Q9H1E1 156 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 A0A1B0GUT8 65 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 A0A1W2PRE2 83 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 HIGD1CA8MV81 97 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 APELAP0DMC3 54 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 UCNP55089 124 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 TNRC6AQ8NDV7 1962 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 A0A0G2JRQ6 117 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 C9JCJ5 164 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 F2RL2O00254 374 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 PEX7O00628 323 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 ZNHIT1O43257 154 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 C3orf79P0CE67 100 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 CCDC144NLQ6NUI1 221 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 OSTCQ9NRP0 149 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 MOB4Q9Y3A3 225 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 ADAMTS9Q9P2N4 1935 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV1-6A0A0C4DH72 117 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 C9JQL5 133 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 TRACP01848 142 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 KIR2DL4Q99706 377 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 CSTL1Q9H114 145 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 ZNF71Q9NQZ8 489 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
CDC42BPA-204ENST00000366767 RBMY1BA6NDE4 496 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM8BA6NDV4 472 aa4.43□□□□□ -1.7
CDC42BPA-204ENST00000366767 RBMY1EA6NEQ0 496 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms