RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
CUX1-203ENST00000360264 USP24Q9UPU5 2620 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 SAA2-SAA4A0A096LPE2 208 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 TNFSF13O75888 250 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 SAA2P0DJI9 122 aaPredicted RBP8.09□□□□□ -1.11
CUX1-203ENST00000360264 CCL20P78556 96 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 ZSWIM8A7E2V4 1837 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 A0A087WX48 190 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 LINC00158P58513 81 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 CLDN16Q9Y5I7 305 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 SLC17A3O00476 420 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 SIGLEC5O15389 551 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 PIN1P1O15428 100 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 OR10W1Q8NGF6 305 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 JPT2Q9H910 190 aa8.09□□□□□ -1.12
CUX1-203ENST00000360264 IGF2RP11717 2491 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 PSCAO43653 123 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 CCL1P22362 96 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 RHOGP84095 191 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 TMEM95Q3KNT9 176 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 FAM216BQ8N7L0 139 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 ZIC3O60481 467 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 NAPSAO96009 420 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 S4R3C0 116 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 PROB1E7EW31 1015 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 INSP01308 110 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 ZNF585BQ52M93 769 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 C18orf15Q96N68 181 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 HBDP02042 147 aa8.08□□□□□ -1.12
CUX1-203ENST00000360264 CRYBA2P53672 197 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 EPOPA6NHQ4 379 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 LHX2P50458 406 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 MUC21Q5SSG8 566 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 NIT1Q86X76 327 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 ATP5L2Q7Z4Y8 100 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 RTBDNQ9BSG5 229 aaPredicted RBP8.07□□□□□ -1.12
CUX1-203ENST00000360264 IGHV2-26A0A0B4J1V2 119 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 AMELYQ99218 206 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 IGLV3-32A0A0A0MS00 114 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 B4DSR2 109 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 A0A1B0GV90 55 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 IGHV4-39P01824 125 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 ZXDCQ2QGD7 858 aaPredicted RBP8.07□□□□□ -1.12
CUX1-203ENST00000360264 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
CUX1-203ENST00000360264 TRAV8-4A0A0B4J246 113 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 GREM1O60565 184 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 TOMM40O96008 361 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 FOXA3P55318 350 aaPredicted RBP8.07□□□□□ -1.12
CUX1-203ENST00000360264 IFITM2Q01629 132 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 MORN2Q502X0 79 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 OSTCQ9NRP0 149 aa8.07□□□□□ -1.12
CUX1-203ENST00000360264 SLC25A16P16260 332 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
CUX1-203ENST00000360264 ZNF415Q09FC8 603 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
CUX1-203ENST00000360264 PRCDQ00LT1 54 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 C9orf106Q8NAJ2 232 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 IGKCP01834 107 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 SPANXA1Q9NS26 97 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 TRAV9-2A0A087WT02 112 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 CD300CQ08708 224 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
CUX1-203ENST00000360264 OBSL1O75147 1896 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 NSUN5P1Q3KNT7 163 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 PLXNA3P51805 1871 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
CUX1-203ENST00000360264 TEX38Q6PEX7 206 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 DERL1Q9BUN8 251 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 IGKV3D-20A0A0C4DH25 116 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 C17orf98A8MV24 154 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 TDGF1P3P51864 188 aa8.06□□□□□ -1.12
CUX1-203ENST00000360264 SPAG8Q99932 426 aaPredicted RBP8.05□□□□□ -1.12
CUX1-203ENST00000360264 SAP30O75446 220 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 ASCL4Q6XD76 172 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 LAMTOR3Q9UHA4 124 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 IGFBP3P17936 291 aaPredicted RBP8.05□□□□□ -1.12
CUX1-203ENST00000360264 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 TSKUQ8WUA8 353 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 IMMP1LQ96LU5 166 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 SIGLEC12Q96PQ1 595 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 PLSCR4Q9NRQ2 329 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 CELA3AP09093 270 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 TRAV41A0A0B4J266 112 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 ERCC8Q13216 396 aa8.05□□□□□ -1.12
CUX1-203ENST00000360264 MBNL3Q9NUK0 354 aaKnown RBP8.05□□□□□ -1.12
CUX1-203ENST00000360264 KIF26AQ9ULI4 1882 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms