RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 NBASA2RRP1 2371 aa16.72■□□□□ 0.27
TRIM3-202ENST00000359518 OR4C13Q8NGP0 309 aa16.72■□□□□ 0.27
TRIM3-202ENST00000359518 MBD6Q96DN6 1003 aa16.72■□□□□ 0.27
TRIM3-202ENST00000359518 LINC00574Q9H8X3 128 aa16.72■□□□□ 0.27
TRIM3-202ENST00000359518 CUL9Q8IWT3 2517 aa16.72■□□□□ 0.27
TRIM3-202ENST00000359518 SIAH2O43255 324 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 TCF21O43680 179 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 LINC00322Q6ZN03 302 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-202ENST00000359518 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 LAMTOR2Q9Y2Q5 125 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 PTPRZ1P23471 2315 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-202ENST00000359518 BPIFB3P59826 476 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 PDPNQ86YL7 162 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 OR1L4Q8NGR5 311 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 GRAMD2BQ96HH9 432 aa16.71■□□□□ 0.27
TRIM3-202ENST00000359518 A0A1W2PPI3 338 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 C22orf46C9J442 243 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 ZNF137PP52743 207 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 C1orf185Q5T7R7 199 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 SPOCK3Q9BQ16 436 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 TNFRSF19Q9NS68 423 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 CBY1Q9Y3M2 126 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 TMEM177Q53S58 311 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 ST6GALNAC6Q969X2 333 aa16.7■□□□□ 0.26
TRIM3-202ENST00000359518 ATP5IP56385 69 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-202ENST00000359518 ARL6IP6Q8N6S5 226 aa16.69■□□□□ 0.26
TRIM3-202ENST00000359518 TMEM167AQ8TBQ9 72 aa16.69■□□□□ 0.26
TRIM3-202ENST00000359518 ALKBH7Q9BT30 221 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-202ENST00000359518 FAM181BA6NEQ2 426 aa16.69■□□□□ 0.26
TRIM3-202ENST00000359518 TEX36Q5VZQ5 186 aa16.69■□□□□ 0.26
TRIM3-202ENST00000359518 EPDR1Q9UM22 224 aa16.69■□□□□ 0.26
TRIM3-202ENST00000359518 TIMM8BQ9Y5J9 83 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-202ENST00000359518 SPTA1P02549 2419 aa16.68■□□□□ 0.26
TRIM3-202ENST00000359518 FAM87AP0C7U9 286 aa16.68■□□□□ 0.26
TRIM3-202ENST00000359518 MRPL52Q86TS9 123 aaKnown RBP16.68■□□□□ 0.26
TRIM3-202ENST00000359518 NDUFB8O95169 186 aa16.68■□□□□ 0.26
TRIM3-202ENST00000359518 SUB1P53999 127 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM3-202ENST00000359518 SPATA12Q7Z6I5 190 aa16.68■□□□□ 0.26
TRIM3-202ENST00000359518 PGLYRP4Q96LB8 373 aa16.68■□□□□ 0.26
TRIM3-202ENST00000359518 FSTL3O95633 263 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 HIST1H1EP10412 219 aaKnown RBP16.67■□□□□ 0.26
TRIM3-202ENST00000359518 TNFRSF1AP19438 455 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 CNTFRP26992 372 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 Q71RC1 249 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-202ENST00000359518 OR8B2Q96RD0 313 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 ASCL2Q99929 193 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 LRBAP50851 2863 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 IGLV2-23P01705 113 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 ZNF835Q9Y2P0 537 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 TRAV8-1A0A0A6YYK1 113 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 ADIPOQQ15848 244 aa16.67■□□□□ 0.26
TRIM3-202ENST00000359518 MRPL27Q9P0M9 148 aaKnown RBP16.67■□□□□ 0.26
TRIM3-202ENST00000359518 C17orf100A8MU93 164 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 NBEAP1P0C6P0 100 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 GAGE1Q13065 139 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 UNQ5815/PRO19632Q6UWF5 114 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 FAM231DQ6ZW35 169 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 ZFP30Q9Y2G7 519 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 WASHC3Q9Y3C0 194 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 PPIAL4EA0A075B759 164 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 PPIAL4DF5H284 164 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 PPIAL4FP0DN26 164 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 TSPOP30536 169 aa16.66■□□□□ 0.26
TRIM3-202ENST00000359518 LINC00173Q6ZV60 143 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 KLHDC1Q8N7A1 406 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 VSTM2AQ8TAG5 236 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 MCRIP2Q9BUT9 160 aaKnown RBP16.65■□□□□ 0.26
TRIM3-202ENST00000359518 IGLL1P15814 213 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 TMEM108Q6UXF1 575 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 WIPF2Q8TF74 440 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-202ENST00000359518 MED13LQ71F56 2210 aa16.65■□□□□ 0.26
TRIM3-202ENST00000359518 ZNF138P52744 262 aa16.64■□□□□ 0.26
TRIM3-202ENST00000359518 BSPH1Q075Z2 132 aa16.64■□□□□ 0.26
TRIM3-202ENST00000359518 SSX8Q7RTT4 187 aa16.64■□□□□ 0.26
TRIM3-202ENST00000359518 C7orf69Q9H7B7 122 aa16.64■□□□□ 0.26
TRIM3-202ENST00000359518 RELNP78509 3460 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 H0Y8G0 127 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 NDUFB3O43676 98 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 GTSF1Q8WW33 167 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 URB1-AS1Q96HZ7 61 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 CTSZQ9UBR2 303 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 ERASQ7Z444 233 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 PERPQ96FX8 193 aa16.64■□□□□ 0.25
TRIM3-202ENST00000359518 MEF2CQ06413 473 aaPredicted RBP16.63■□□□□ 0.25
TRIM3-202ENST00000359518 VMA21Q3ZAQ7 101 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 GPR82Q96P67 336 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 ZNF292O60281 2723 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 MYCNOSP40205 109 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 PIP4P1Q86T03 277 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 WNK2Q9Y3S1 2297 aa16.63■□□□□ 0.25
TRIM3-202ENST00000359518 C2orf70A6NJV1 201 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 ETFRF1Q6IPR1 90 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 THAP8Q8NA92 274 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 P01737 135 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 ANKRD39Q53RE8 183 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 LRRC10Q5BKY1 277 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 TMEM186Q96B77 213 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
TRIM3-202ENST00000359518 TRAV9-2A0A087WT02 112 aa16.62■□□□□ 0.25
TRIM3-202ENST00000359518 IGLC7A0M8Q6 106 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms